- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000126254
- RNA binding motif prote…
- LSM5
- LSM5 homolog, U6 small …
- 0.991
- PPI
- PRPF6
- pre-mRNA processing fac…
- 0.979
- PPI
- CD2BP2
- CD2 cytoplasmic tail bi…
- 0.973
- PPI
- SNRPA
- small nuclear ribonucle…
- 0.970
- PPI
- PPIL1
- peptidylprolyl isomeras…
- 0.969
- PPI
- SNRNP27
- small nuclear ribonucle…
- 0.964
- PPI
- HNRNPK
- heterogeneous nuclear r…
- 0.964
- PPI
- PRPF4
- pre-mRNA processing fac…
- 0.960
- PPI
- SNRPE
- small nuclear ribonucle…
- 0.953
- PPI
- SNRPG
- small nuclear ribonucle…
- 0.946
- PPI
- COPS5
- COP9 signalosome subuni…
- 0.935
- PPI
- YARS2
- tyrosyl-tRNA synthetase…
- 0.926
- PPI
- PCBP1
- poly(rC) binding protei…
- 0.912
- PPI
- SNRNP40
- small nuclear ribonucle…
- 0.911
- Complex
- RBM45
- RNA binding motif prote…
- 0.901
- PPI
- MRPS26
- mitochondrial ribosomal…
- 0.894
- PPI
- RCC1L
- RCC1 like
- 0.879
- PPI
- RBFOX2
- RNA binding fox-1 homol…
- 0.872
- PPI
- SUPV3L1
- Suv3 like RNA helicase
- 0.838
- PPI
- RAB11B
- RAB11B, member RAS onco…
- 0.831
- Complex
- CAND1
- cullin associated and n…
- 0.817
- PPI
- TBL3
- transducin beta like 3
- 0.775
- Complex
- RBM4
- RNA binding motif prote…
- 0.762
- PPI
- MRPS21
- mitochondrial ribosomal…
- 0.757
- PPI
- SLC33A1
- solute carrier family 3…
- 0.744
- PPI
- SERBP1
- SERPINE1 mRNA binding p…
- 0.719
- PPI
- MRPS7
- mitochondrial ribosomal…
- 0.697
- PPI
- PRPF3
- pre-mRNA processing fac…
- 0.696
- PPI
- RPUSD3
- RNA pseudouridine synth…
- 0.650
- PPI
- CAMK2G
- calcium/calmodulin depe…
- 0.623
- PPI
ENSG00000126254
RNA binding motif protein 42
- Use as query
- Use pair as query
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- Ensembl
- UniProt
- NCBI
PRPF4
pre-mRNA processing factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPA
small nuclear ribonucleoprotein polypeptide A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COPS5
COP9 signalosome subunit 5
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- Add to current query
- Ensembl
- UniProt
- NCBI
TBL3
transducin beta like 3
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- Add to current query
- Ensembl
- UniProt
- NCBI
CD2BP2
CD2 cytoplasmic tail binding protein 2
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- Ensembl
- UniProt
- NCBI
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
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- Ensembl
- UniProt
- NCBI
PRPF6
pre-mRNA processing factor 6
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- Add to current query
- Ensembl
- UniProt
- NCBI
SUPV3L1
Suv3 like RNA helicase
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- Ensembl
- UniProt
- NCBI
CAND1
cullin associated and neddylation dissociated 1
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- Ensembl
- UniProt
- NCBI
SNRNP40
small nuclear ribonucleoprotein U5 subunit 40
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- Add to current query
- Ensembl
- UniProt
- NCBI
RBFOX2
RNA binding fox-1 homolog 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRNP27
small nuclear ribonucleoprotein U4/U6.U5 subunit 27
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- Add to current query
- Ensembl
- UniProt
- NCBI
PPIL1
peptidylprolyl isomerase like 1
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- Ensembl
- UniProt
- NCBI
SERBP1
SERPINE1 mRNA binding protein 1
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- Ensembl
- UniProt
- NCBI
MRPS21
mitochondrial ribosomal protein S21
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- Ensembl
- UniProt
- NCBI
PRPF3
pre-mRNA processing factor 3
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- Add to current query
- Ensembl
- UniProt
- NCBI
MRPS7
mitochondrial ribosomal protein S7
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- Ensembl
- UniProt
- NCBI
RAB11B
RAB11B, member RAS oncogene family
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPE
small nuclear ribonucleoprotein polypeptide E
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPG
small nuclear ribonucleoprotein polypeptide G
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM45
RNA binding motif protein 45
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPUSD3
RNA pseudouridine synthase D3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
YARS2
tyrosyl-tRNA synthetase 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPK
heterogeneous nuclear ribonucleoprotein K
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PCBP1
poly(rC) binding protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SLC33A1
solute carrier family 33 member 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RCC1L
RCC1 like
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM4
RNA binding motif protein 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CAMK2G
calcium/calmodulin dependent protein kinase II gamma
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
MRPS26
mitochondrial ribosomal protein S26
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
16
|
PRPF4 | ENSG00000136875 | pre-mRNA processing factor 4 | ||
| O43172 | ||||
| 9128 | ||||
| Spliceosome | ||||
18
|
SNRPA | ENSG00000077312 | small nuclear ribonucleoprotein polypeptide A | ||
| M0QXK2 M0QZG7 M0R0G9 M0R221 M0R268 M0R2B8 P09012 | ||||
| 6626 | ||||
| Spliceosome | ||||
15
|
COPS5 | ENSG00000121022 | COP9 signalosome subunit 5 | ||
| E5RFS1 E5RG35 E5RHF2 E5RHH5 E5RK55 Q92905 | ||||
| 10987 | ||||
18
|
TBL3 | ENSG00000183751 | transducin beta like 3 | ||
| A0A087WYP7 H3BN88 J3KNP2 Q12788 | ||||
| 10607 | ||||
| Ribosome biogenesis in eukaryotes | ||||
15
|
CD2BP2 | ENSG00000169217 | CD2 cytoplasmic tail binding protein 2 | ||
| O95400 | ||||
| 10421 | ||||
18
|
LSM5 | ENSG00000106355 | LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| B8ZZF8 F8W8Y8 Q9Y4Y9 | ||||
| 23658 | ||||
| RNA degradation Spliceosome | ||||
16
|
PRPF6 | ENSG00000101161 | pre-mRNA processing factor 6 | ||
| O94906 | ||||
| 24148 | ||||
| Spliceosome | ||||
13
|
SUPV3L1 | ENSG00000156502 | Suv3 like RNA helicase | ||
| B1AR60 Q8IYB8 | ||||
| 6832 | ||||
23
|
CAND1 | ENSG00000111530 | cullin associated and neddylation dissociated 1 | ||
| A0A0C4DGH5 F5H6I6 H0YH27 Q86VP6 | ||||
| 55832 | ||||
21
|
SNRNP40 | ENSG00000060688 | small nuclear ribonucleoprotein U5 subunit 40 | ||
| Q96DI7 Q9NSS8 | ||||
| 9410 | ||||
| Spliceosome | ||||
4
|
RBFOX2 | ENSG00000100320 | RNA binding fox-1 homolog 2 | ||
| B0QYV1 B0QYY4 B0QYY6 B0QYY7 O43251 S4R3K7 S4R469 | ||||
| 23543 | ||||
15
|
SNRNP27 | ENSG00000124380 | small nuclear ribonucleoprotein U4/U6.U5 subunit 27 | ||
| B8ZZ98 H0YBW5 Q8WVK2 | ||||
| 11017 | ||||
| Spliceosome | ||||
17
|
PPIL1 | ENSG00000137168 | peptidylprolyl isomerase like 1 | ||
| Q9Y3C6 | ||||
| 51645 | ||||
| Spliceosome | ||||
6
|
SERBP1 | ENSG00000142864 | SERPINE1 mRNA binding protein 1 | ||
| Q8NC51 | ||||
| 26135 | ||||
7
|
MRPS21 | ENSG00000266472 | mitochondrial ribosomal protein S21 | ||
| P82921 | ||||
| 54460 | ||||
| Ribosome | ||||
19
|
PRPF3 | ENSG00000117360 | pre-mRNA processing factor 3 | ||
| O43395 | ||||
| 9129 | ||||
| Spliceosome | ||||
15
|
MRPS7 | ENSG00000125445 | mitochondrial ribosomal protein S7 | ||
| J3KSI8 J3KSV8 J3QKW2 J3QLS3 J3QQS1 Q9Y2R9 | ||||
| 51081 | ||||
| Ribosome | ||||
4
|
RAB11B | ENSG00000185236 | RAB11B, member RAS oncogene family | ||
| M0R2D0 M0R377 Q15907 | ||||
| 9230 | ||||
| AMPK signaling pathway | ||||
| Endocytosis | ||||
16
|
SNRPE | ENSG00000182004 | small nuclear ribonucleoprotein polypeptide E | ||
| A6NHK2 P62304 | ||||
| 6635 | ||||
| Spliceosome | ||||
19
|
SNRPG | ENSG00000143977 | small nuclear ribonucleoprotein polypeptide G | ||
| C9JVQ0 F5H013 P62308 Q49AN9 | ||||
| 6637 | ||||
| Spliceosome | ||||
5
|
RBM45 | ENSG00000155636 | RNA binding motif protein 45 | ||
| H7BZE0 H7C476 Q8IUH3 | ||||
| 129831 | ||||
3
|
RPUSD3 | ENSG00000156990 | RNA pseudouridine synthase D3 | ||
| C9JM75 H7C0K7 H7C0K9 H7C0R9 H7C1H7 H7C2C3 H7C454 Q6P087 | ||||
| 285367 | ||||
16
|
YARS2 | ENSG00000139131 | tyrosyl-tRNA synthetase 2 | ||
| H0YHS6 Q9Y2Z4 | ||||
| 51067 | ||||
| Aminoacyl-tRNA biosynthesis | ||||
14
|
HNRNPK | ENSG00000165119 | heterogeneous nuclear ribonucleoprotein K | ||
| P61978 Q5T6W2 S4R359 S4R457 | ||||
| 3190 | ||||
| Spliceosome | ||||
18
|
PCBP1 | ENSG00000169564 | poly(rC) binding protein 1 | ||
| Q15365 | ||||
| 5093 | ||||
| Spliceosome | ||||
3
|
SLC33A1 | ENSG00000169359 | solute carrier family 33 member 1 | ||
| A0A2R8Y359 A0A2R8Y5I5 A0A2R8YEX5 A0A2R8YF57 H7C532 H7C562 H7C577 O00400 | ||||
| 9197 | ||||
| Glycosphingolipid biosynthesis - ganglio series | ||||
3
|
RCC1L | ENSG00000274523 | RCC1 like | ||
| A0A087WT38 Q96I51 | ||||
| 81554 | ||||
5
|
RBM4 | ENSG00000173933 | RNA binding motif protein 4 | ||
| D6R9K7 E9PB51 J3QRR5 Q9BWF3 | ||||
| 5936 | ||||
1
|
CAMK2G | ENSG00000148660 | calcium/calmodulin dependent protein kinase II gamma | ||
| A0A2Q3DQE3 H0Y6G2 Q13555 Q5SWX3 Q8WU40 | ||||
| 818 | ||||
| Calcium signaling pathway Adrenergic signaling in cardiomyocytes Neurotrophin signaling pathway Long-term potentiation Oocyte meiosis Olfactory transduction cAMP signaling pathway Wnt signaling pathway ErbB signaling pathway HIF-1 signaling pathway Melanogenesis Dopaminergic synapse GnRH signaling pathway Cholinergic synapse Glucagon signaling pathway Oxytocin signaling pathway | ||||
7
|
MRPS26 | ENSG00000125901 | mitochondrial ribosomal protein S26 | ||
| Q9BYN8 | ||||
| 64949 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 282.14 KB | |
H.sapiens_subnetwork.tsv | 33.34 KB |