- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000125351
- UPF3B regulator of nons…
- EIF4A3
- eukaryotic translation …
- 1.000
- PPI
- UPF2
- UPF2 regulator of nonse…
- 1.000
- PPI
- UPF1
- UPF1 RNA helicase and A…
- 1.000
- PPI
- MAGOH
- mago homolog, exon junc…
- 1.000
- PPI
- RBM8A
- RNA binding motif prote…
- 1.000
- PPI
- CASC3
- CASC3 exon junction com…
- 1.000
- PPI
- ALYREF
- Aly/REF export factor
- 0.999
- PPI
- EIF6
- eukaryotic translation …
- 0.999
- PPI
- RNPS1
- RNA binding protein wit…
- 0.999
- PPI
- CIAO1
- cytosolic iron-sulfur a…
- 0.999
- PPI
- NCBP1
- nuclear cap binding pro…
- 0.999
- PPI
- MCRS1
- microspherule protein 1
- 0.998
- PPI
- CAND1
- cullin associated and n…
- 0.998
- PPI
- NCBP2
- nuclear cap binding pro…
- 0.997
- Complex
- SRSF1
- serine and arginine ric…
- 0.996
- Complex
- SMG6
- SMG6 nonsense mediated …
- 0.996
- Complex
- POLDIP3
- DNA polymerase delta in…
- 0.995
- PPI
- STAU1
- staufen double-stranded…
- 0.994
- PPI
- SRPK2
- SRSF protein kinase 2
- 0.994
- PPI
- UPF3A
- UPF3A regulator of nons…
- 0.993
- PPI
- NKAP
- NFKB activating protein
- 0.991
- PPI
- RLIM
- ring finger protein, LI…
- 0.990
- PPI
- DDX39B
- DExD-box helicase 39B
- 0.986
- Complex
- NXF1
- nuclear RNA export fact…
- 0.984
- PPI
- EFTUD2
- elongation factor Tu GT…
- 0.982
- PPI
- DCAF13
- DDB1 and CUL4 associate…
- 0.982
- Metabolic
- SAP18
- Sin3A associated protei…
- 0.979
- Complex
- SMG1
- SMG1 nonsense mediated …
- 0.975
- PPI
- EIF3A
- eukaryotic translation …
- 0.971
- Metabolic
- ELP3
- elongator acetyltransfe…
- 0.965
- Metabolic
ENSG00000125351
UPF3B regulator of nonsense mediated mRNA decay
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- Ensembl
- UniProt
- NCBI
NXF1
nuclear RNA export factor 1
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- Ensembl
- UniProt
- NCBI
SRSF1
serine and arginine rich splicing factor 1
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- Ensembl
- UniProt
- NCBI
ALYREF
Aly/REF export factor
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- Ensembl
- UniProt
- NCBI
RNPS1
RNA binding protein with serine rich domain 1
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- Ensembl
- UniProt
- H3BMM9
- H3BMS0
- H3BNI3
- H3BNU7
- H3BP82
- H3BPG5
- H3BRK4
- H3BTC0
- H3BTR6
- H3BTV0
- H3BTY0
- H3BUG0
- H3BUL0
- H3BV80
- Q15287
- NCBI
DDX39B
DExD-box helicase 39B
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- Ensembl
- UniProt
- A0A0A0MT12
- F6QYI9
- F6R6M7
- F6S2B7
- F6S4E6
- F6SXL5
- F6TRA5
- F6U6E2
- F6UJC5
- F6WLT2
- H0Y400
- H0YCC6
- Q13838
- Q5STU3
- NCBI
CIAO1
cytosolic iron-sulfur assembly component 1
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- Ensembl
- UniProt
- NCBI
RBM8A
RNA binding motif protein 8A
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- Ensembl
- UniProt
- NCBI
NCBP2
nuclear cap binding protein subunit 2
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- Ensembl
- UniProt
- NCBI
NCBP1
nuclear cap binding protein subunit 1
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- Ensembl
- UniProt
- NCBI
STAU1
staufen double-stranded RNA binding protein 1
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- Ensembl
- UniProt
- NCBI
CASC3
CASC3 exon junction complex subunit
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- Ensembl
- UniProt
- NCBI
EFTUD2
elongation factor Tu GTP binding domain containing 2
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- Ensembl
- UniProt
- NCBI
EIF6
eukaryotic translation initiation factor 6
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- Ensembl
- UniProt
- NCBI
SAP18
Sin3A associated protein 18
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- Ensembl
- UniProt
- NCBI
EIF4A3
eukaryotic translation initiation factor 4A3
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- Ensembl
- UniProt
- NCBI
MAGOH
mago homolog, exon junction complex subunit
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- Ensembl
- UniProt
- NCBI
UPF3A
UPF3A regulator of nonsense mediated mRNA decay
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- Ensembl
- UniProt
- NCBI
CAND1
cullin associated and neddylation dissociated 1
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- Ensembl
- UniProt
- NCBI
UPF1
UPF1 RNA helicase and ATPase
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- Ensembl
- UniProt
- NCBI
MCRS1
microspherule protein 1
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- Ensembl
- UniProt
- NCBI
SRPK2
SRSF protein kinase 2
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- Ensembl
- UniProt
- NCBI
EIF3A
eukaryotic translation initiation factor 3 subunit A
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- Ensembl
- UniProt
- NCBI
UPF2
UPF2 regulator of nonsense mediated mRNA decay
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- Ensembl
- UniProt
- NCBI
DCAF13
DDB1 and CUL4 associated factor 13
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- Ensembl
- UniProt
- NCBI
ELP3
elongator acetyltransferase complex subunit 3
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- Ensembl
- UniProt
- NCBI
NKAP
NFKB activating protein
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- Ensembl
- UniProt
- NCBI
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase
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- Ensembl
- UniProt
- NCBI
SMG6
SMG6 nonsense mediated mRNA decay factor
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- Ensembl
- UniProt
- NCBI
RLIM
ring finger protein, LIM domain interacting
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- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000125351 | ENSG00000125351 | UPF3B regulator of nonsense mediated mRNA decay | ||
| A0A087WYC8 A0A1B0GVA2 Q9BZI7 | ||||
| 65109 | ||||
| RNA transport mRNA surveillance pathway |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
19
|
NXF1 | ENSG00000162231 | nuclear RNA export factor 1 | ||
| B4E227 E9PIN3 E9PLA7 E9PMV7 E9PQA4 H0YDU0 Q9UBU9 | ||||
| 10482 | ||||
| Ribosome biogenesis in eukaryotes RNA transport mRNA surveillance pathway | ||||
18
|
SRSF1 | ENSG00000136450 | serine and arginine rich splicing factor 1 | ||
| J3KSR8 J3KSW7 J3KTL2 J3QQV5 Q07955 | ||||
| 6426 | ||||
| IL-17 signaling pathway | ||||
| Spliceosome | ||||
24
|
ALYREF | ENSG00000183684 | Aly/REF export factor | ||
| E9PB61 Q86V81 | ||||
| 10189 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
24
|
RNPS1 | ENSG00000205937 | RNA binding protein with serine rich domain 1 | ||
| H3BMM9 H3BMS0 H3BNI3 H3BNU7 H3BP82 H3BPG5 H3BRK4 H3BTC0 H3BTR6 H3BTV0 H3BTY0 H3BUG0 H3BUL0 H3BV80 Q15287 | ||||
| 10921 | ||||
| RNA transport mRNA surveillance pathway | ||||
23
|
DDX39B | ENSG00000198563 | DExD-box helicase 39B | ||
| A0A0A0MT12 F6QYI9 F6R6M7 F6S2B7 F6S4E6 F6SXL5 F6TRA5 F6U6E2 F6UJC5 F6WLT2 H0Y400 H0YCC6 Q13838 Q5STU3 | ||||
| 7919 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
14
|
CIAO1 | ENSG00000144021 | cytosolic iron-sulfur assembly component 1 | ||
| O76071 | ||||
| 9391 | ||||
25
|
RBM8A | ENSG00000265241 | RNA binding motif protein 8A | ||
| A0A0J9YW13 Q9Y5S9 | ||||
| 9939 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
25
|
NCBP2 | ENSG00000114503 | nuclear cap binding protein subunit 2 | ||
| B3KSB0 C9JKF4 C9JQX9 F8WE41 P52298 | ||||
| 22916 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
25
|
NCBP1 | ENSG00000136937 | nuclear cap binding protein subunit 1 | ||
| F2Z2T1 Q09161 X6R941 | ||||
| 4686 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
11
|
STAU1 | ENSG00000124214 | staufen double-stranded RNA binding protein 1 | ||
| A0A087X1A5 F6UDC6 O95793 Q5JW28 Q5JW30 | ||||
| 6780 | ||||
16
|
CASC3 | ENSG00000108349 | CASC3 exon junction complex subunit | ||
| J3KSY7 J3QSC4 K7EQ38 O15234 | ||||
| 22794 | ||||
| RNA transport mRNA surveillance pathway | ||||
22
|
EFTUD2 | ENSG00000108883 | elongation factor Tu GTP binding domain containing 2 | ||
| K7EIT3 K7EIV5 K7EJ74 K7EP67 K7EQ26 K7ERJ5 Q15029 | ||||
| 9343 | ||||
| Spliceosome | ||||
25
|
EIF6 | ENSG00000242372 | eukaryotic translation initiation factor 6 | ||
| A0A0B4J1Y7 B7ZBH1 F8WD20 F8WDS6 P56537 | ||||
| 3692 | ||||
| Ribosome biogenesis in eukaryotes | ||||
20
|
SAP18 | ENSG00000150459 | Sin3A associated protein 18 | ||
| H7BZW6 O00422 U3KPY7 U3KQ12 | ||||
| 10284 | ||||
| RNA transport mRNA surveillance pathway | ||||
28
|
EIF4A3 | ENSG00000141543 | eukaryotic translation initiation factor 4A3 | ||
| I3L3H2 P38919 | ||||
| 9775 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
26
|
MAGOH | ENSG00000162385 | mago homolog, exon junction complex subunit | ||
| P61326 | ||||
| 4116 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
19
|
UPF3A | ENSG00000169062 | UPF3A regulator of nonsense mediated mRNA decay | ||
| A0A087WZ33 Q9H1J1 | ||||
| 65110 | ||||
| RNA transport mRNA surveillance pathway | ||||
21
|
CAND1 | ENSG00000111530 | cullin associated and neddylation dissociated 1 | ||
| A0A0C4DGH5 F5H6I6 H0YH27 Q86VP6 | ||||
| 55832 | ||||
24
|
UPF1 | ENSG00000005007 | UPF1 RNA helicase and ATPase | ||
| Q92900 | ||||
| 5976 | ||||
| RNA transport mRNA surveillance pathway | ||||
11
|
MCRS1 | ENSG00000187778 | microspherule protein 1 | ||
| F8VP44 F8VVA6 F8VZC2 F8W0I9 F8W126 H0YI67 H0YIA0 Q96EZ8 | ||||
| 10445 | ||||
20
|
SRPK2 | ENSG00000135250 | SRSF protein kinase 2 | ||
| C9J2M4 C9JWF7 F8WAV6 F8WBW4 H7C521 H7C5L6 P78362 | ||||
| 6733 | ||||
22
|
EIF3A | ENSG00000107581 | eukaryotic translation initiation factor 3 subunit A | ||
| Q14152 | ||||
| 8661 | ||||
| RNA transport | ||||
20
|
UPF2 | ENSG00000151461 | UPF2 regulator of nonsense mediated mRNA decay | ||
| Q9HAU5 | ||||
| 26019 | ||||
21
|
DCAF13 | ENSG00000164934 | DDB1 and CUL4 associated factor 13 | ||
| A0A087WT20 A0A087X1F8 B3KME9 E5RHM4 Q9NV06 | ||||
| 25879 | ||||
20
|
ELP3 | ENSG00000134014 | elongator acetyltransferase complex subunit 3 | ||
| B4DKA4 E5RG26 E5RHR2 E5RHY2 E5RIC0 E5RIU1 E5RIZ7 H0YAP7 H0YC54 Q9H9T3 | ||||
| 55140 | ||||
14
|
NKAP | ENSG00000101882 | NFKB activating protein | ||
| A0A494C050 Q8N5F7 | ||||
| 79576 | ||||
8
|
SMG1 | ENSG00000157106 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase | ||
| A0A087WXM7 A0A087X1K8 E9PNP6 H3BPS6 H3BQN7 H3BR09 I3L0W2 I3L144 I3L400 J3KRA9 Q96Q15 | ||||
| 23049 | ||||
| mRNA surveillance pathway | ||||
5
|
SMG6 | ENSG00000070366 | SMG6 nonsense mediated mRNA decay factor | ||
| I3L176 I3L1W8 I3L355 I3L390 I3L3A9 I3L421 K7EKV2 K7ELM2 K7ENH7 Q86US8 | ||||
| 23293 | ||||
| mRNA surveillance pathway | ||||
1
|
RLIM | ENSG00000131263 | ring finger protein, LIM domain interacting | ||
| Q9NVW2 | ||||
| 51132 | ||||
15
|
POLDIP3 | ENSG00000100227 | DNA polymerase delta interacting protein 3 | ||
| F6VRR5 F8WCX5 F8WEE2 Q6R954 Q8WUT1 Q9BY77 | ||||
| 84271 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 311.97 KB | |
H.sapiens_subnetwork.tsv | 54.14 KB |