Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000124275
- 5-methyltetrahydrofolat…
- GMCL1
- germ cell-less 1, sperm…
- 0.654
- PPI
- RPA1
- replication protein A1
- 0.577
- Metabolic
- KPNA3
- karyopherin subunit alp…
- 0.484
- Metabolic
- ALG8
- ALG8 alpha-1,3-glucosyl…
- 0.483
- Metabolic
- MCCC1
- methylcrotonoyl-CoA car…
- 0.478
- Metabolic
- SLU7
- SLU7 homolog, splicing …
- 0.464
- Complex
- TTC4
- tetratricopeptide repea…
- 0.463
- Metabolic
- NMD3
- NMD3 ribosome export ad…
- 0.457
- Metabolic
- NDC80
- NDC80 kinetochore compl…
- 0.444
- Metabolic
- UBA1
- ubiquitin like modifier…
- 0.439
- Metabolic
- SF3A3
- splicing factor 3a subu…
- 0.436
- Metabolic
- RRN3
- RRN3 homolog, RNA polym…
- 0.428
- Metabolic
- EMC7
- ER membrane protein com…
- 0.421
- Metabolic
- DDX47
- DEAD-box helicase 47
- 0.406
- Metabolic
- TSR1
- TSR1 ribosome maturatio…
- 0.403
- Complex
Subnetwork gene interactions
ENSG00000124275
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
FunCoup
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- Ensembl
- UniProt
- NCBI
RRN3
RRN3 homolog, RNA polymerase I transcription factor
FunCoup
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- Ensembl
- UniProt
- NCBI
EMC7
ER membrane protein complex subunit 7
FunCoup
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- Ensembl
- UniProt
- NCBI
RPA1
replication protein A1
FunCoup
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- Ensembl
- UniProt
- NCBI
SLU7
SLU7 homolog, splicing factor
FunCoup
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- Ensembl
- UniProt
- NCBI
SF3A3
splicing factor 3a subunit 3
FunCoup
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- Ensembl
- UniProt
- NCBI
GMCL1
germ cell-less 1, spermatogenesis associated
FunCoup
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- Ensembl
- UniProt
- NCBI
MCCC1
methylcrotonoyl-CoA carboxylase 1
FunCoup
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- Ensembl
- UniProt
- NCBI
UBA1
ubiquitin like modifier activating enzyme 1
FunCoup
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- Ensembl
- UniProt
- NCBI
TTC4
tetratricopeptide repeat domain 4
FunCoup
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- Ensembl
- UniProt
- NCBI
DDX47
DEAD-box helicase 47
FunCoup
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- Ensembl
- UniProt
- NCBI
NMD3
NMD3 ribosome export adaptor
FunCoup
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- Ensembl
- UniProt
- NCBI
KPNA3
karyopherin subunit alpha 3
FunCoup
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- Ensembl
- UniProt
- NCBI
ALG8
ALG8 alpha-1,3-glucosyltransferase
FunCoup
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- Ensembl
- UniProt
- E9PK79
- E9PKA5
- E9PLP7
- E9PNE2
- E9PP04
- E9PP80
- E9PP96
- E9PR58
- H0YCV0
- H0YD42
- H0YDD3
- H0YDQ1
- H0YDV4
- H0YEE0
- Q9BVK2
- NCBI
NDC80
NDC80 kinetochore complex component
FunCoup
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- Ensembl
- UniProt
- NCBI
Query genes
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
12
|
RRN3 | ENSG00000085721 | RRN3 homolog, RNA polymerase I transcription factor | ||
| F5H148 H3BMT1 Q9NYV6 | ||||
| 54700 | ||||
9
|
EMC7 | ENSG00000134153 | ER membrane protein complex subunit 7 | ||
| H0YDT8 H0YDX2 Q9NPA0 | ||||
| 56851 | ||||
14
|
RPA1 | ENSG00000132383 | replication protein A1 | ||
| I3L2M5 I3L4R8 I3L524 P27694 | ||||
| 6117 | ||||
| DNA replication Fanconi anemia pathway Homologous recombination Mismatch repair Nucleotide excision repair | ||||
10
|
SLU7 | ENSG00000164609 | SLU7 homolog, splicing factor | ||
| A0A0C4DGD2 E5RGM7 E5RK41 O95391 | ||||
| 10569 | ||||
| Spliceosome | ||||
13
|
SF3A3 | ENSG00000183431 | splicing factor 3a subunit 3 | ||
| Q12874 | ||||
| 10946 | ||||
| Spliceosome | ||||
1
|
GMCL1 | ENSG00000087338 | germ cell-less 1, spermatogenesis associated | ||
| Q96IK5 | ||||
| 64395 | ||||
6
|
MCCC1 | ENSG00000078070 | methylcrotonoyl-CoA carboxylase 1 | ||
| E9PG35 E9PHF7 F2Z2Z7 F2Z3E2 F5GYT8 F8WDI3 F8WF46 G5E9X5 Q96RQ3 | ||||
| 56922 | ||||
| Valine, leucine and isoleucine degradation | ||||
14
|
UBA1 | ENSG00000130985 | ubiquitin like modifier activating enzyme 1 | ||
| P22314 Q5JRR6 Q5JRR9 Q5JRS0 Q5JRS1 Q5JRS2 Q5JRS3 | ||||
| 7317 | ||||
| Ubiquitin mediated proteolysis | ||||
12
|
TTC4 | ENSG00000243725 | tetratricopeptide repeat domain 4 | ||
| O95801 | ||||
| 7268 | ||||
11
|
DDX47 | ENSG00000213782 | DEAD-box helicase 47 | ||
| F5H1N9 Q9H0S4 | ||||
| 51202 | ||||
12
|
NMD3 | ENSG00000169251 | NMD3 ribosome export adaptor | ||
| C9IY70 C9IZW9 C9J0B9 C9JA08 C9K0C2 Q96D46 | ||||
| 51068 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
6
|
KPNA3 | ENSG00000102753 | karyopherin subunit alpha 3 | ||
| H0Y4S9 O00505 | ||||
| 3839 | ||||
8
|
ALG8 | ENSG00000159063 | ALG8 alpha-1,3-glucosyltransferase | ||
| E9PK79 E9PKA5 E9PLP7 E9PNE2 E9PP04 E9PP80 E9PP96 E9PR58 H0YCV0 H0YD42 H0YDD3 H0YDQ1 H0YDV4 H0YEE0 Q9BVK2 | ||||
| 79053 | ||||
| N-Glycan biosynthesis | ||||
9
|
NDC80 | ENSG00000080986 | NDC80 kinetochore complex component | ||
| I3L0P0 I3L4G3 O14777 V9GYM9 | ||||
| 10403 | ||||
8
|
TSR1 | ENSG00000167721 | TSR1 ribosome maturation factor | ||
| I3L1Q5 I3L4E8 I3L4T0 Q2NL82 | ||||
| 55720 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 152.26 KB | |
H.sapiens_subnetwork.tsv | 15.40 KB |