- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000120948
- TAR DNA binding protein
- TIAL1
- TIA1 cytotoxic granule …
- 1.000
- PPI
- SSB
- small RNA binding exonu…
- 1.000
- PPI
- LSM6
- LSM6 homolog, U6 small …
- 1.000
- PPI
- EED
- embryonic ectoderm deve…
- 1.000
- Complex
- DHX36
- DEAH-box helicase 36
- 1.000
- PPI
- ELAVL1
- ELAV like RNA binding p…
- 1.000
- PPI
- PATL1
- PAT1 homolog 1, process…
- 1.000
- PPI
- DDX6
- DEAD-box helicase 6
- 1.000
- PPI
- HNRNPAB
- heterogeneous nuclear r…
- 1.000
- PPI
- PPP1CA
- protein phosphatase 1 c…
- 1.000
- PPI
- KHSRP
- KH-type splicing regula…
- 1.000
- PPI
- PABPN1
- poly(A) binding protein…
- 1.000
- PPI
- HNRNPA0
- heterogeneous nuclear r…
- 1.000
- PPI
- RPS17
- ribosomal protein S17
- 0.999
- PPI
- SRSF6
- serine and arginine ric…
- 0.999
- PPI
- EIF2S1
- eukaryotic translation …
- 0.999
- PPI
- ATXN2L
- ataxin 2 like
- 0.999
- PPI
- BMI1
- BMI1 proto-oncogene, po…
- 0.999
- Complex
- NOP58
- NOP58 ribonucleoprotein
- 0.999
- PPI
- CAPRIN1
- cell cycle associated p…
- 0.999
- PPI
- ATP1A1
- ATPase Na+/K+ transport…
- 0.999
- PPI
- MTREX
- Mtr4 exosome RNA helica…
- 0.999
- PPI
- KPNB1
- karyopherin subunit bet…
- 0.999
- PPI
- ADSS2
- adenylosuccinate syntha…
- 0.999
- PPI
- CDC37
- cell division cycle 37,…
- 0.999
- Complex
- SRSF7
- serine and arginine ric…
- 0.999
- PPI
- HNRNPK
- heterogeneous nuclear r…
- 0.999
- PPI
- PTBP1
- polypyrimidine tract bi…
- 0.999
- PPI
- NUFIP2
- nuclear FMR1 interactin…
- 0.999
- PPI
- CTDSPL2
- CTD small phosphatase l…
- 0.999
- PPI
ENSG00000120948
TAR DNA binding protein
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- Ensembl
- UniProt
- A0A087WTG4
- A0A087WV68
- A0A087WVX6
- A0A087WW61
- A0A087WX29
- A0A087WX67
- A0A087WXQ5
- A0A087WXV3
- A0A087WYY0
- A0A087WZC9
- A0A087WZM1
- A0A087X260
- A0A0A0MSV7
- A0A0A0N0M3
- A0A1W2PNU8
- B1AKP7
- G3V162
- K7EJ99
- K7EJM5
- K7EL26
- K7EN94
- K7ENM9
- Q13148
- NCBI
SSB
small RNA binding exonuclease protection factor La
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- Ensembl
- UniProt
- NCBI
BMI1
BMI1 proto-oncogene, polycomb ring finger
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- Ensembl
- UniProt
- NCBI
KHSRP
KH-type splicing regulatory protein
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- Ensembl
- UniProt
- NCBI
EED
embryonic ectoderm development
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- Ensembl
- UniProt
- NCBI
PTBP1
polypyrimidine tract binding protein 1
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- Add to current query
- Ensembl
- UniProt
- A0A087WTS6
- A0A087WU68
- A0A087WUW5
- A0A0D9SF20
- A0A0U1RRM4
- A6NLN1
- K7EK45
- K7EKJ7
- K7EKX4
- K7ELW5
- K7ES59
- P26599
- NCBI
HNRNPAB
heterogeneous nuclear ribonucleoprotein A/B
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- Ensembl
- UniProt
- NCBI
HNRNPK
heterogeneous nuclear ribonucleoprotein K
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- Ensembl
- UniProt
- NCBI
PATL1
PAT1 homolog 1, processing body mRNA decay factor
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- Add to current query
- Ensembl
- UniProt
- NCBI
MTREX
Mtr4 exosome RNA helicase
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- Ensembl
- UniProt
- NCBI
EIF2S1
eukaryotic translation initiation factor 2 subunit alpha
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX6
DEAD-box helicase 6
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
ATXN2L
ataxin 2 like
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- Ensembl
- UniProt
- NCBI
NUFIP2
nuclear FMR1 interacting protein 2
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- Ensembl
- UniProt
- NCBI
SRSF6
serine and arginine rich splicing factor 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPA0
heterogeneous nuclear ribonucleoprotein A0
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- Ensembl
- UniProt
- NCBI
PPP1CA
protein phosphatase 1 catalytic subunit alpha
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- Ensembl
- UniProt
- NCBI
CDC37
cell division cycle 37, HSP90 cochaperone
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- Ensembl
- UniProt
- NCBI
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1
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- Ensembl
- UniProt
- NCBI
RPS17
ribosomal protein S17
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- Ensembl
- UniProt
- NCBI
SRSF7
serine and arginine rich splicing factor 7
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- Ensembl
- UniProt
- NCBI
ADSS2
adenylosuccinate synthase 2
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- Ensembl
- UniProt
- NCBI
ELAVL1
ELAV like RNA binding protein 1
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- Ensembl
- UniProt
- NCBI
CTDSPL2
CTD small phosphatase like 2
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- Ensembl
- UniProt
- NCBI
ATP1A1
ATPase Na+/K+ transporting subunit alpha 1
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- Ensembl
- UniProt
- NCBI
PABPN1
poly(A) binding protein nuclear 1
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- Ensembl
- UniProt
- NCBI
DHX36
DEAH-box helicase 36
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
KPNB1
karyopherin subunit beta 1
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- Ensembl
- UniProt
- NCBI
NOP58
NOP58 ribonucleoprotein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CAPRIN1
cell cycle associated protein 1
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000120948 | ENSG00000120948 | TAR DNA binding protein | ||
| A0A087WTG4 A0A087WV68 A0A087WVX6 A0A087WW61 A0A087WX29 A0A087WX67 A0A087WXQ5 A0A087WXV3 A0A087WYY0 A0A087WZC9 A0A087WZM1 A0A087X260 A0A0A0MSV7 A0A0A0N0M3 A0A1W2PNU8 B1AKP7 G3V162 K7EJ99 K7EJM5 K7EL26 K7EN94 K7ENM9 Q13148 | ||||
| 23435 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
26
|
SSB | ENSG00000138385 | small RNA binding exonuclease protection factor La | ||
| E7ERC4 E9PFL9 E9PGX9 P05455 | ||||
| 6741 | ||||
11
|
BMI1 | ENSG00000168283 | BMI1 proto-oncogene, polycomb ring finger | ||
| P35226 Q5T8Z2 Q5T8Z4 Q5T8Z6 | ||||
| 100532731 648 | ||||
27
|
KHSRP | ENSG00000088247 | KH-type splicing regulatory protein | ||
| A0A087WTP3 M0QXW7 M0QYG1 M0QYH3 M0R0C6 M0R0I5 M0R251 M0R263 M0R3J3 Q92945 | ||||
| 8570 | ||||
23
|
EED | ENSG00000074266 | embryonic ectoderm development | ||
| A0A5F9ZI63 E9PJK2 E9PMU3 H0YEL4 O75530 | ||||
| 8726 | ||||
27
|
PTBP1 | ENSG00000011304 | polypyrimidine tract binding protein 1 | ||
| A0A087WTS6 A0A087WU68 A0A087WUW5 A0A0D9SF20 A0A0U1RRM4 A6NLN1 K7EK45 K7EKJ7 K7EKX4 K7ELW5 K7ES59 P26599 | ||||
| 5725 | ||||
23
|
HNRNPAB | ENSG00000197451 | heterogeneous nuclear ribonucleoprotein A/B | ||
| D6R9P3 D6RBZ0 D6RD18 Q99729 | ||||
| 3182 | ||||
24
|
HNRNPK | ENSG00000165119 | heterogeneous nuclear ribonucleoprotein K | ||
| P61978 Q5T6W2 S4R359 S4R457 | ||||
| 3190 | ||||
| Spliceosome | ||||
13
|
PATL1 | ENSG00000166889 | PAT1 homolog 1, processing body mRNA decay factor | ||
| Q86TB9 | ||||
| 219988 | ||||
| RNA degradation | ||||
27
|
MTREX | ENSG00000039123 | Mtr4 exosome RNA helicase | ||
| D6REC7 H0Y8U3 H0YAC4 P42285 | ||||
| 23517 | ||||
| RNA degradation | ||||
22
|
EIF2S1 | ENSG00000134001 | eukaryotic translation initiation factor 2 subunit alpha | ||
| G3V4T5 H0YJS4 P05198 | ||||
| 1965 | ||||
| Apoptosis | ||||
| Protein processing in endoplasmic reticulum Autophagy - animal RNA transport | ||||
24
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
22
|
DDX6 | ENSG00000110367 | DEAD-box helicase 6 | ||
| P26196 Q8IV96 | ||||
| 1656 | ||||
| RNA degradation | ||||
20
|
ATXN2L | ENSG00000168488 | ataxin 2 like | ||
| A0A0C4DGL7 H3BMX1 H3BPQ7 H3BQ14 H3BQX7 H3BRB0 H3BSK9 H3BSQ5 H3BUE3 H3BUF6 Q8WWM7 | ||||
| 11273 | ||||
4
|
NUFIP2 | ENSG00000108256 | nuclear FMR1 interacting protein 2 | ||
| Q7Z417 | ||||
| 57532 | ||||
19
|
SRSF6 | ENSG00000124193 | serine and arginine rich splicing factor 6 | ||
| A0A590UJK4 A0A590UJP7 A0A590UK01 Q13247 | ||||
| 6431 | ||||
| Spliceosome | ||||
22
|
HNRNPA0 | ENSG00000177733 | heterogeneous nuclear ribonucleoprotein A0 | ||
| Q13151 | ||||
| 10949 | ||||
21
|
PPP1CA | ENSG00000172531 | protein phosphatase 1 catalytic subunit alpha | ||
| E9PMD7 F5H037 F5H1L6 P62136 | ||||
| 5499 | ||||
| Long-term potentiation Focal adhesion Oocyte meiosis cAMP signaling pathway cGMP-PKG signaling pathway Adrenergic signaling in cardiomyocytes Dopaminergic synapse Vascular smooth muscle contraction Hippo signaling pathway Insulin signaling pathway Oxytocin signaling pathway | ||||
| mRNA surveillance pathway | ||||
12
|
CDC37 | ENSG00000105401 | cell division cycle 37, HSP90 cochaperone | ||
| K7EIU0 K7EJ06 K7EKQ2 K7EL68 K7EQA9 Q16543 | ||||
| 11140 | ||||
| PI3K-Akt signaling pathway | ||||
22
|
TIAL1 | ENSG00000151923 | TIA1 cytotoxic granule associated RNA binding protein like 1 | ||
| A0A087WX93 A6NKZ9 E7ETC0 E7ETJ9 Q01085 | ||||
| 7073 | ||||
24
|
RPS17 | ENSG00000182774 | ribosomal protein S17 | ||
| A0A075B716 H0YN73 H0YN88 P08708 | ||||
| 6218 | ||||
| Ribosome | ||||
24
|
SRSF7 | ENSG00000115875 | serine and arginine rich splicing factor 7 | ||
| A0A0B4J1Z1 C9JAB2 F8WEA1 H7BZZ6 H7C1N1 Q16629 | ||||
| 6432 | ||||
| Spliceosome | ||||
20
|
ADSS2 | ENSG00000035687 | adenylosuccinate synthase 2 | ||
| P30520 | ||||
| 159 | ||||
| Alanine, aspartate and glutamate metabolism Purine metabolism | ||||
23
|
ELAVL1 | ENSG00000066044 | ELAV like RNA binding protein 1 | ||
| M0QZR9 M0R055 Q15717 | ||||
| 1994 | ||||
| AMPK signaling pathway IL-17 signaling pathway | ||||
6
|
CTDSPL2 | ENSG00000137770 | CTD small phosphatase like 2 | ||
| H0YMB4 H0YMH7 H0YNU2 H0YNW9 Q05D32 | ||||
| 51496 | ||||
10
|
ATP1A1 | ENSG00000163399 | ATPase Na+/K+ transporting subunit alpha 1 | ||
| P05023 Q5TC01 Q5TC02 Q5TC05 | ||||
| 476 | ||||
| cAMP signaling pathway Thyroid hormone signaling pathway cGMP-PKG signaling pathway Adrenergic signaling in cardiomyocytes Cardiac muscle contraction | ||||
| Protein digestion and absorption Carbohydrate digestion and absorption | ||||
20
|
PABPN1 | ENSG00000100836 | poly(A) binding protein nuclear 1 | ||
| B4DEH8 G3V4T2 H0YJH9 Q86U42 | ||||
| 8106 | ||||
| mRNA surveillance pathway | ||||
15
|
DHX36 | ENSG00000174953 | DEAH-box helicase 36 | ||
| E7EWK3 H7C514 H7C5F5 Q9H2U1 | ||||
| 170506 | ||||
| RNA degradation | ||||
28
|
KPNB1 | ENSG00000108424 | karyopherin subunit beta 1 | ||
| J3KS06 J3KTM9 J3QKQ5 J3QR48 J3QRG4 Q14974 | ||||
| 3837 | ||||
| RNA transport | ||||
24
|
NOP58 | ENSG00000055044 | NOP58 ribonucleoprotein | ||
| F8WED0 H7BZ72 Q9Y2X3 | ||||
| 51602 | ||||
| Ribosome biogenesis in eukaryotes | ||||
17
|
CAPRIN1 | ENSG00000135387 | cell cycle associated protein 1 | ||
| E9PLA9 G3V153 Q14444 | ||||
| 4076 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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- Use as query
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jSquid_subnetworks.xml | 309.02 KB | |
H.sapiens_subnetwork.tsv | 55.17 KB |