- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000114127
- 5'-3' exoribonuclease 1
- DCP1A
- decapping mRNA 1A
- 0.990
- PPI
- UPF2
- UPF2 regulator of nonse…
- 0.978
- Complex
- UPF1
- UPF1 RNA helicase and A…
- 0.941
- PPI
- EIF4A3
- eukaryotic translation …
- 0.939
- PPI
- YTHDC2
- YTH domain containing 2
- 0.903
- PPI
- PABPC4
- poly(A) binding protein…
- 0.891
- PPI
- SMG7
- SMG7 nonsense mediated …
- 0.750
- Complex
- UPF3B
- UPF3B regulator of nons…
- 0.681
- Complex
- SMG5
- SMG5 nonsense mediated …
- 0.674
- Complex
- SMG6
- SMG6 nonsense mediated …
- 0.667
- Complex
- WAPL
- WAPL cohesin release fa…
- 0.657
- PPI
- PABPC1
- poly(A) binding protein…
- 0.603
- Complex
- EDC4
- enhancer of mRNA decapp…
- 0.570
- PPI
- CCT5
- chaperonin containing T…
- 0.557
- PPI
- SMARCD2
- SWI/SNF related, matrix…
- 0.513
- PPI
- STAM2
- signal transducing adap…
- 0.480
- PPI
- BAG6
- BAG cochaperone 6
- 0.478
- PPI
- SMG1
- SMG1 nonsense mediated …
- 0.477
- PPI
- HEATR1
- HEAT repeat containing 1
- 0.448
- PPI
ENSG00000114127
5'-3' exoribonuclease 1
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- Ensembl
- UniProt
- NCBI
PABPC1
poly(A) binding protein cytoplasmic 1
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A087WTT1
- E5RFD8
- E5RGC4
- E5RGH3
- E5RH24
- E5RHG7
- E5RJB9
- E5RJM8
- E7EQV3
- E7ERJ7
- H0YAP2
- H0YAR2
- H0YAS6
- H0YAS7
- H0YAW6
- H0YB75
- H0YB86
- H0YBN4
- H0YC10
- P11940
- NCBI
SMG5
SMG5 nonsense mediated mRNA decay factor
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- Ensembl
- UniProt
- NCBI
UPF3B
UPF3B regulator of nonsense mediated mRNA decay
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- Ensembl
- UniProt
- NCBI
PABPC4
poly(A) binding protein cytoplasmic 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CCT5
chaperonin containing TCP1 subunit 5
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- Add to current query
- Ensembl
- UniProt
- NCBI
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase
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- Add to current query
- Ensembl
- UniProt
- NCBI
BAG6
BAG cochaperone 6
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A1B0GX79
- F6S6P2
- F6TC96
- F6U1F2
- F6U341
- F6UR09
- F6VEM6
- F6WML8
- F6X9W3
- F6XTU0
- H0Y4L1
- H0Y710
- H0Y759
- H0Y7K4
- P46379
- X6REW1
- NCBI
SMG6
SMG6 nonsense mediated mRNA decay factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMG7
SMG7 nonsense mediated mRNA decay factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UPF1
UPF1 RNA helicase and ATPase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UPF2
UPF2 regulator of nonsense mediated mRNA decay
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCD2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
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- Ensembl
- UniProt
- NCBI
EIF4A3
eukaryotic translation initiation factor 4A3
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- Add to current query
- Ensembl
- UniProt
- NCBI
DCP1A
decapping mRNA 1A
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- Add to current query
- Ensembl
- UniProt
- NCBI
EDC4
enhancer of mRNA decapping 4
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HEATR1
HEAT repeat containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
STAM2
signal transducing adaptor molecule 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
YTHDC2
YTH domain containing 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WAPL
WAPL cohesin release factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
19
|
ENSG00000114127 | ENSG00000114127 | 5'-3' exoribonuclease 1 | ||
| C9JCZ8 F8WDA0 H7C583 H7C5E4 Q8IZH2 | ||||
| 54464 | ||||
| RNA degradation Ribosome biogenesis in eukaryotes |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
13
|
PABPC1 | ENSG00000070756 | poly(A) binding protein cytoplasmic 1 | ||
| A0A087WTT1 E5RFD8 E5RGC4 E5RGH3 E5RH24 E5RHG7 E5RJB9 E5RJM8 E7EQV3 E7ERJ7 H0YAP2 H0YAR2 H0YAS6 H0YAS7 H0YAW6 H0YB75 H0YB86 H0YBN4 H0YC10 P11940 | ||||
| 26986 | ||||
| RNA degradation RNA transport mRNA surveillance pathway | ||||
8
|
SMG5 | ENSG00000198952 | SMG5 nonsense mediated mRNA decay factor | ||
| Q9UPR3 | ||||
| 23381 | ||||
| mRNA surveillance pathway | ||||
12
|
UPF3B | ENSG00000125351 | UPF3B regulator of nonsense mediated mRNA decay | ||
| A0A087WYC8 A0A1B0GVA2 Q9BZI7 | ||||
| 65109 | ||||
| RNA transport mRNA surveillance pathway | ||||
9
|
PABPC4 | ENSG00000090621 | poly(A) binding protein cytoplasmic 4 | ||
| B1ANR0 B1ANR1 H0Y5F5 H0Y6X6 H0YCC8 H0YEQ8 H0YER0 H0YEU6 Q13310 | ||||
| 8761 | ||||
| RNA degradation RNA transport mRNA surveillance pathway | ||||
11
|
CCT5 | ENSG00000150753 | chaperonin containing TCP1 subunit 5 | ||
| B7ZAR1 D6RIZ7 E7ENZ3 E9PCA1 H0Y914 H0Y958 P48643 | ||||
| 22948 | ||||
8
|
SMG1 | ENSG00000157106 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase | ||
| A0A087WXM7 A0A087X1K8 E9PNP6 H3BPS6 H3BQN7 H3BR09 I3L0W2 I3L144 I3L400 J3KRA9 Q96Q15 | ||||
| 23049 | ||||
| mRNA surveillance pathway | ||||
2
|
BAG6 | ENSG00000204463 | BAG cochaperone 6 | ||
| A0A1B0GX79 F6S6P2 F6TC96 F6U1F2 F6U341 F6UR09 F6VEM6 F6WML8 F6X9W3 F6XTU0 H0Y4L1 H0Y710 H0Y759 H0Y7K4 P46379 X6REW1 | ||||
| 7917 | ||||
10
|
SMG6 | ENSG00000070366 | SMG6 nonsense mediated mRNA decay factor | ||
| I3L176 I3L1W8 I3L355 I3L390 I3L3A9 I3L421 K7EKV2 K7ELM2 K7ENH7 Q86US8 | ||||
| 23293 | ||||
| mRNA surveillance pathway | ||||
9
|
SMG7 | ENSG00000116698 | SMG7 nonsense mediated mRNA decay factor | ||
| B1ALB4 D6R9J3 D6RAD0 E9PBK2 E9PD50 E9PEK3 Q92540 | ||||
| 9887 | ||||
| mRNA surveillance pathway | ||||
16
|
UPF1 | ENSG00000005007 | UPF1 RNA helicase and ATPase | ||
| Q92900 | ||||
| 5976 | ||||
| RNA transport mRNA surveillance pathway | ||||
14
|
UPF2 | ENSG00000151461 | UPF2 regulator of nonsense mediated mRNA decay | ||
| Q9HAU5 | ||||
| 26019 | ||||
6
|
SMARCD2 | ENSG00000108604 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 | ||
| B9EGA3 J3KMX2 J3KT18 J3QQL7 J3QS33 J3QWB6 Q92925 | ||||
| 6603 | ||||
14
|
EIF4A3 | ENSG00000141543 | eukaryotic translation initiation factor 4A3 | ||
| I3L3H2 P38919 | ||||
| 9775 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
8
|
DCP1A | ENSG00000272886 | decapping mRNA 1A | ||
| A0A087WT55 A0A087WVE6 A0A087WXD0 Q9NPI6 | ||||
| 55802 | ||||
| RNA degradation | ||||
7
|
EDC4 | ENSG00000038358 | enhancer of mRNA decapping 4 | ||
| I3L0V0 I3L2F4 I3L3M2 Q6P2E9 | ||||
| 23644 | ||||
| RNA degradation | ||||
7
|
HEATR1 | ENSG00000119285 | HEAT repeat containing 1 | ||
| Q5T3Q7 Q6P664 Q9H583 | ||||
| 55127 | ||||
| Ribosome biogenesis in eukaryotes | ||||
3
|
STAM2 | ENSG00000115145 | signal transducing adaptor molecule 2 | ||
| O75886 | ||||
| 10254 | ||||
| JAK-STAT signaling pathway | ||||
| Endocytosis | ||||
3
|
YTHDC2 | ENSG00000047188 | YTH domain containing 2 | ||
| D6R9T8 D6RA70 D6RF50 Q9H6S0 | ||||
| 64848 | ||||
3
|
WAPL | ENSG00000062650 | WAPL cohesin release factor | ||
| F6QZY1 Q7Z5K2 Q8WVX6 | ||||
| 23063 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 176.01 KB | |
H.sapiens_subnetwork.tsv | 14.79 KB |