Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000113722
- caudal type homeobox 1
- CDK12
- cyclin dependent kinase…
- 0.960
- PPI
- HIRA
- histone cell cycle regu…
- 0.954
- PPI
- CSNK1E
- casein kinase 1 epsilon
- 0.881
- PPI
- SDAD1
- SDA1 domain containing 1
- 0.868
- PPI
- TBP
- TATA-box binding protein
- 0.867
- PPI
- CSNK1D
- casein kinase 1 delta
- 0.842
- PPI
- POU3F1
- POU class 3 homeobox 1
- 0.796
- Signaling
- BUD13
- BUD13 homolog
- 0.787
- PPI
- UBN2
- ubinuclein 2
- 0.779
- PPI
- SETD3
- SET domain containing 3…
- 0.778
- PPI
- DLX4
- distal-less homeobox 4
- 0.776
- PPI
- CASC3
- CASC3 exon junction com…
- 0.680
- PPI
- PUM2
- pumilio RNA binding fam…
- 0.661
- PPI
- UPF1
- UPF1 RNA helicase and A…
- 0.628
- PPI
- NKX2-3
- NK2 homeobox 3
- 0.623
- PPI
- DLX3
- distal-less homeobox 3
- 0.622
- PPI
- HOXC13
- homeobox C13
- 0.577
- PPI
- DLX5
- distal-less homeobox 5
- 0.497
- Signaling
- HOXD11
- homeobox D11
- 0.449
- Metabolic
- RBM19
- RNA binding motif prote…
- 0.447
- PPI
- H3-2
- H3.2 histone (putative)
- 0.440
- PPI
- UTP3
- UTP3 small subunit proc…
- 0.416
- PPI
Subnetwork gene interactions
ENSG00000113722
caudal type homeobox 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HOXD11
homeobox D11
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CSNK1D
casein kinase 1 delta
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SDAD1
SDA1 domain containing 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HIRA
histone cell cycle regulator
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UTP3
UTP3 small subunit processome component
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POU3F1
POU class 3 homeobox 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PUM2
pumilio RNA binding family member 2
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DLX5
distal-less homeobox 5
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TBP
TATA-box binding protein
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM19
RNA binding motif protein 19
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UPF1
UPF1 RNA helicase and ATPase
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NKX2-3
NK2 homeobox 3
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CASC3
CASC3 exon junction complex subunit
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CSNK1E
casein kinase 1 epsilon
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DLX3
distal-less homeobox 3
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDK12
cyclin dependent kinase 12
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HOXC13
homeobox C13
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UBN2
ubinuclein 2
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DLX4
distal-less homeobox 4
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BUD13
BUD13 homolog
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SETD3
SET domain containing 3, actin histidine methyltransferase
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
H3-2
H3.2 histone (putative)
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
22
|
ENSG00000113722 | ENSG00000113722 | caudal type homeobox 1 | ||
| A0A087WTJ6 P47902 | ||||
| 1044 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
6
|
HOXD11 | ENSG00000128713 | homeobox D11 | ||
| P31277 | ||||
| 3237 | ||||
11
|
CSNK1D | ENSG00000141551 | casein kinase 1 delta | ||
| B4DLF1 H0Y2N6 H7BYT1 J3KRM8 J3KRS6 J3QQI9 J3QQU8 J3QS70 P48730 | ||||
| 1453 | ||||
| Gap junction Hedgehog signaling pathway Hippo signaling pathway | ||||
7
|
SDAD1 | ENSG00000198301 | SDA1 domain containing 1 | ||
| D6RC74 D6RIR5 E7EW05 F8W8T7 Q9NVU7 | ||||
| 55153 | ||||
11
|
HIRA | ENSG00000100084 | histone cell cycle regulator | ||
| H7C2A7 P54198 | ||||
| 7290 | ||||
10
|
UTP3 | ENSG00000132467 | UTP3 small subunit processome component | ||
| Q9NQZ2 | ||||
| 57050 | ||||
7
|
POU3F1 | ENSG00000185668 | POU class 3 homeobox 1 | ||
| Q03052 | ||||
| 5453 | ||||
5
|
PUM2 | ENSG00000055917 | pumilio RNA binding family member 2 | ||
| A0A0A0MR59 A0A0C4DG68 C9JE24 C9JW01 F2Z366 F8WD57 Q8TB72 | ||||
| 23369 | ||||
5
|
DLX5 | ENSG00000105880 | distal-less homeobox 5 | ||
| P56178 | ||||
| 1749 | ||||
7
|
TBP | ENSG00000112592 | TATA-box binding protein | ||
| A0A1B0GVC6 H0Y6D8 P20226 Q32MN6 Q7Z6S4 Q7Z6S5 | ||||
| 6908 | ||||
| Basal transcription factors | ||||
9
|
RBM19 | ENSG00000122965 | RNA binding motif protein 19 | ||
| H0YIL2 Q9Y4C8 | ||||
| 9904 | ||||
11
|
UPF1 | ENSG00000005007 | UPF1 RNA helicase and ATPase | ||
| Q92900 | ||||
| 5976 | ||||
| RNA transport mRNA surveillance pathway | ||||
5
|
NKX2-3 | ENSG00000119919 | NK2 homeobox 3 | ||
| A0A087WVU3 Q8TAU0 | ||||
| 159296 | ||||
5
|
CASC3 | ENSG00000108349 | CASC3 exon junction complex subunit | ||
| J3KSY7 J3QSC4 K7EQ38 O15234 | ||||
| 22794 | ||||
| RNA transport mRNA surveillance pathway | ||||
7
|
CSNK1E | ENSG00000213923 | casein kinase 1 epsilon | ||
| B0QY34 B0QY35 B0QY36 H0Y5S9 H0Y645 H0Y682 H7C0Y5 H7C3J2 P49674 | ||||
| 102800317 1454 | ||||
| Wnt signaling pathway FoxO signaling pathway Hedgehog signaling pathway Hippo signaling pathway - multiple species Hippo signaling pathway | ||||
5
|
DLX3 | ENSG00000064195 | distal-less homeobox 3 | ||
| F8VXG1 O60479 | ||||
| 1747 | ||||
6
|
CDK12 | ENSG00000167258 | cyclin dependent kinase 12 | ||
| A0A590UJE9 H0YLT2 J3QSD7 Q9NYV4 | ||||
| 51755 | ||||
5
|
HOXC13 | ENSG00000123364 | homeobox C13 | ||
| P31276 | ||||
| 3229 | ||||
2
|
UBN2 | ENSG00000157741 | ubinuclein 2 | ||
| C9J6Y5 H7C4P8 Q6ZU65 | ||||
| 254048 | ||||
4
|
DLX4 | ENSG00000108813 | distal-less homeobox 4 | ||
| Q92988 | ||||
| 1748 | ||||
6
|
BUD13 | ENSG00000137656 | BUD13 homolog | ||
| H7C462 Q9BRD0 | ||||
| 84811 | ||||
1
|
SETD3 | ENSG00000183576 | SET domain containing 3, actin histidine methyltransferase | ||
| C9K0W5 Q6NXR6 Q86TU7 | ||||
| 84193 | ||||
1
|
H3-2 | ENSG00000273213 | H3.2 histone (putative) | ||
| A0A590UJL8 Q5TEC6 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
- Use as query
- Add to current query
jSquid_subnetworks.xml | 182.97 KB | |
H.sapiens_subnetwork.tsv | 13.71 KB |