- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000112941
- terminal nucleotidyltra…
- MTREX
- Mtr4 exosome RNA helica…
- 1.000
- PPI
- ZCCHC7
- zinc finger CCHC-type c…
- 0.999
- PPI
- DHX37
- DEAH-box helicase 37
- 0.998
- Metabolic
- EXOSC2
- exosome component 2
- 0.997
- Metabolic
- AATF
- apoptosis antagonizing …
- 0.996
- Metabolic
- EXOSC10
- exosome component 10
- 0.996
- Metabolic
- POLR2E
- RNA polymerase II subun…
- 0.996
- Metabolic
- DHX38
- DEAH-box helicase 38
- 0.994
- Metabolic
- EXOSC9
- exosome component 9
- 0.994
- Metabolic
- ESF1
- ESF1 nucleolar pre-rRNA…
- 0.994
- Metabolic
- EXOSC4
- exosome component 4
- 0.993
- Metabolic
- SF3A3
- splicing factor 3a subu…
- 0.991
- PPI
- BMS1
- BMS1 ribosome biogenesi…
- 0.990
- Metabolic
- IPO5
- importin 5
- 0.990
- PPI
- NOP53
- NOP53 ribosome biogenes…
- 0.989
- PPI
- WDR3
- WD repeat domain 3
- 0.989
- Metabolic
- POLR2B
- RNA polymerase II subun…
- 0.988
- Metabolic
- KRR1
- KRR1 small subunit proc…
- 0.988
- Metabolic
- DDX52
- DExD-box helicase 52
- 0.987
- Metabolic
- NOL6
- nucleolar protein 6
- 0.986
- Complex
- RBM28
- RNA binding motif prote…
- 0.984
- Metabolic
- SART1
- spliceosome associated …
- 0.984
- Complex
- NOM1
- nucleolar protein with …
- 0.984
- Metabolic
- PUM3
- pumilio RNA binding fam…
- 0.983
- Metabolic
- GRWD1
- glutamate rich WD repea…
- 0.983
- Metabolic
- PES1
- pescadillo ribosomal bi…
- 0.982
- Metabolic
- EXOSC3
- exosome component 3
- 0.981
- Metabolic
- NOP56
- NOP56 ribonucleoprotein
- 0.981
- Complex
- DDX31
- DEAD-box helicase 31
- 0.980
- Metabolic
- SUPT5H
- SPT5 homolog, DSIF elon…
- 0.978
- Metabolic
ENSG00000112941
terminal nucleotidyltransferase 4A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PES1
pescadillo ribosomal biogenesis factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT5H
SPT5 homolog, DSIF elongation factor subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM28
RNA binding motif protein 28
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOM1
nucleolar protein with MIF4G domain 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
KRR1
KRR1 small subunit processome component homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DHX38
DEAH-box helicase 38
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
IPO5
importin 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0D9SG25
- C9J583
- C9J875
- C9JQT6
- C9JXE0
- C9JZ53
- C9JZD8
- E7EQT5
- E7ESZ1
- E7ETV3
- E7ETV8
- E7EV12
- E7EWK4
- E7EX05
- F8WF30
- H0Y3V4
- H0Y8C6
- O00410
- NCBI
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC9
exosome component 9
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2E
RNA polymerase II subunit E
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC2
exosome component 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC4
exosome component 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GRWD1
glutamate rich WD repeat containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC10
exosome component 10
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
AATF
apoptosis antagonizing transcription factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOP53
NOP53 ribosome biogenesis factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOP56
NOP56 ribonucleoprotein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DHX37
DEAH-box helicase 37
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3A3
splicing factor 3a subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MTREX
Mtr4 exosome RNA helicase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PUM3
pumilio RNA binding family member 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BMS1
BMS1 ribosome biogenesis factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC3
exosome component 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDR3
WD repeat domain 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ZCCHC7
zinc finger CCHC-type containing 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX52
DExD-box helicase 52
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOL6
nucleolar protein 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2B
RNA polymerase II subunit B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX31
DEAD-box helicase 31
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SART1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000112941 | ENSG00000112941 | terminal nucleotidyltransferase 4A | ||
| A0A0X1KG68 D6RJD0 Q5XG87 | ||||
| 11044 | ||||
| RNA degradation |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
PES1 | ENSG00000100029 | pescadillo ribosomal biogenesis factor 1 | ||
| B3KXD6 B5MCF9 H7BYY8 H7C267 O00541 | ||||
| 23481 | ||||
23
|
SUPT5H | ENSG00000196235 | SPT5 homolog, DSIF elongation factor subunit | ||
| M0QYL9 M0R105 M0R2M5 O00267 | ||||
| 6829 | ||||
28
|
RBM28 | ENSG00000106344 | RNA binding motif protein 28 | ||
| C9JAA9 C9JE21 H7C5G8 Q9NW13 | ||||
| 55131 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
NOM1 | ENSG00000146909 | nucleolar protein with MIF4G domain 1 | ||
| Q5C9Z4 | ||||
| 64434 | ||||
29
|
KRR1 | ENSG00000111615 | KRR1 small subunit processome component homolog | ||
| Q13601 | ||||
| 11103 | ||||
28
|
DHX38 | ENSG00000140829 | DEAH-box helicase 38 | ||
| H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 | ||||
| 9785 | ||||
| Spliceosome | ||||
29
|
IPO5 | ENSG00000065150 | importin 5 | ||
| A0A0D9SG25 C9J583 C9J875 C9JQT6 C9JXE0 C9JZ53 C9JZD8 E7EQT5 E7ESZ1 E7ETV3 E7ETV8 E7EV12 E7EWK4 E7EX05 F8WF30 H0Y3V4 H0Y8C6 O00410 | ||||
| 3843 | ||||
30
|
ESF1 | ENSG00000089048 | ESF1 nucleolar pre-rRNA processing protein homolog | ||
| A0A087WX71 Q9H501 | ||||
| 51575 | ||||
30
|
EXOSC9 | ENSG00000123737 | exosome component 9 | ||
| D6R905 D6RA17 D6RAP4 D6RIY6 H0Y9L5 Q06265 | ||||
| 5393 | ||||
| RNA degradation | ||||
30
|
POLR2E | ENSG00000099817 | RNA polymerase II subunit E | ||
| A0A087WVN5 A0A087WVZ9 A0A087WWX0 A0A0A0MQR7 K7EJ87 K7EQN2 P19388 | ||||
| 5434 | ||||
| Cytosolic DNA-sensing pathway | ||||
| RNA polymerase | ||||
30
|
EXOSC2 | ENSG00000130713 | exosome component 2 | ||
| A3KFL1 A3KFL2 A3KFL5 Q13868 | ||||
| 23404 | ||||
| RNA degradation | ||||
29
|
EXOSC4 | ENSG00000178896 | exosome component 4 | ||
| E9PI41 E9PPI9 Q9NPD3 | ||||
| 54512 | ||||
| RNA degradation | ||||
29
|
GRWD1 | ENSG00000105447 | glutamate rich WD repeat containing 1 | ||
| M0QX71 Q9BQ67 | ||||
| 83743 | ||||
30
|
EXOSC10 | ENSG00000171824 | exosome component 10 | ||
| K7EJ37 Q01780 | ||||
| 5394 | ||||
| RNA degradation | ||||
29
|
AATF | ENSG00000275700 | apoptosis antagonizing transcription factor | ||
| A0A087WTH8 A0A087WW41 A0A087WWS8 Q9NY61 | ||||
| 26574 | ||||
30
|
NOP53 | ENSG00000105373 | NOP53 ribosome biogenesis factor | ||
| M0QX73 M0QYZ9 M0QZ34 M0QZU5 Q9NZM5 | ||||
| 29997 | ||||
30
|
NOP56 | ENSG00000101361 | NOP56 ribonucleoprotein | ||
| A0A494C128 H0Y653 H0YDU4 O00567 Q5JXT2 | ||||
| 10528 | ||||
| Ribosome biogenesis in eukaryotes | ||||
29
|
DHX37 | ENSG00000150990 | DEAH-box helicase 37 | ||
| F5H3Y4 Q8IY37 | ||||
| 57647 | ||||
29
|
SF3A3 | ENSG00000183431 | splicing factor 3a subunit 3 | ||
| Q12874 | ||||
| 10946 | ||||
| Spliceosome | ||||
30
|
MTREX | ENSG00000039123 | Mtr4 exosome RNA helicase | ||
| D6REC7 H0Y8U3 H0YAC4 P42285 | ||||
| 23517 | ||||
| RNA degradation | ||||
30
|
PUM3 | ENSG00000080608 | pumilio RNA binding family member 3 | ||
| Q15397 S4R3K8 | ||||
| 9933 | ||||
29
|
BMS1 | ENSG00000165733 | BMS1 ribosome biogenesis factor | ||
| Q14692 | ||||
| 9790 | ||||
| Ribosome biogenesis in eukaryotes | ||||
27
|
EXOSC3 | ENSG00000107371 | exosome component 3 | ||
| Q9NQT5 | ||||
| 51010 | ||||
| RNA degradation | ||||
30
|
WDR3 | ENSG00000065183 | WD repeat domain 3 | ||
| Q6PDA5 Q9UNX4 | ||||
| 10885 | ||||
| Ribosome biogenesis in eukaryotes | ||||
22
|
ZCCHC7 | ENSG00000147905 | zinc finger CCHC-type containing 7 | ||
| Q8N3Z6 X6R4A7 | ||||
| 84186 | ||||
| RNA degradation | ||||
28
|
DDX52 | ENSG00000278053 | DExD-box helicase 52 | ||
| A0A087WTD6 A0A087X069 A0A087X121 A0A087X1P7 Q9Y2R4 | ||||
| 11056 | ||||
29
|
NOL6 | ENSG00000165271 | nucleolar protein 6 | ||
| A0A0A0MRW6 A0A0C4DFX0 Q9H6R4 | ||||
| 65083 | ||||
| Ribosome biogenesis in eukaryotes | ||||
28
|
POLR2B | ENSG00000047315 | RNA polymerase II subunit B | ||
| A0A1W2PPT5 C9J2Y9 C9J4M6 C9JMN3 C9JZW8 P30876 | ||||
| 5431 | ||||
| RNA polymerase | ||||
25
|
DDX31 | ENSG00000125485 | DEAD-box helicase 31 | ||
| F8WAJ0 Q9H8H2 | ||||
| 64794 | ||||
24
|
SART1 | ENSG00000175467 | spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP | ||
| E9PQI8 O43290 | ||||
| 9092 | ||||
| Spliceosome |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 325.08 KB | |
H.sapiens_subnetwork.tsv | 84.14 KB |