- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000108963
- diphthamide biosynthesi…
- DPH2
- diphthamide biosynthesi…
- 1.000
- PPI
- DPH3
- diphthamide biosynthesi…
- 0.999
- PPI
- NIP7
- nucleolar pre-rRNA proc…
- 0.998
- Metabolic
- PES1
- pescadillo ribosomal bi…
- 0.998
- Metabolic
- BRIX1
- biogenesis of ribosomes…
- 0.997
- Metabolic
- WDR3
- WD repeat domain 3
- 0.996
- Metabolic
- MRTO4
- MRT4 homolog, ribosome …
- 0.996
- Metabolic
- POLR1C
- RNA polymerase I and II…
- 0.996
- Complex
- NOP56
- NOP56 ribonucleoprotein
- 0.995
- Metabolic
- MMS19
- MMS19 homolog, cytosoli…
- 0.994
- PPI
- DDX47
- DEAD-box helicase 47
- 0.994
- Complex
- GRWD1
- glutamate rich WD repea…
- 0.993
- Metabolic
- BUD23
- BUD23 rRNA methyltransf…
- 0.992
- Metabolic
- RBM8A
- RNA binding motif prote…
- 0.991
- PPI
- RSL24D1
- ribosomal L24 domain co…
- 0.991
- Metabolic
- EIF4A3
- eukaryotic translation …
- 0.991
- Metabolic
- NSUN5
- NOP2/Sun RNA methyltran…
- 0.989
- Complex
- NMD3
- NMD3 ribosome export ad…
- 0.989
- Metabolic
- WIPI2
- WD repeat domain, phosp…
- 0.989
- PPI
- RPS15
- ribosomal protein S15
- 0.989
- Metabolic
- GPI
- glucose-6-phosphate iso…
- 0.988
- Metabolic
- SNU13
- small nuclear ribonucle…
- 0.988
- Metabolic
- PUS7
- pseudouridine synthase 7
- 0.988
- Metabolic
- VDAC2
- voltage dependent anion…
- 0.987
- PPI
- WDR36
- WD repeat domain 36
- 0.987
- Metabolic
- NOP58
- NOP58 ribonucleoprotein
- 0.986
- Metabolic
- PUM3
- pumilio RNA binding fam…
- 0.985
- Metabolic
- BOP1
- BOP1 ribosomal biogenes…
- 0.985
- Complex
- TSR1
- TSR1 ribosome maturatio…
- 0.984
- Metabolic
- DIMT1
- DIMT1 rRNA methyltransf…
- 0.984
- Metabolic
ENSG00000108963
diphthamide biosynthesis 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NSUN5
NOP2/Sun RNA methyltransferase 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDR3
WD repeat domain 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EIF4A3
eukaryotic translation initiation factor 4A3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BRIX1
biogenesis of ribosomes BRX1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM8A
RNA binding motif protein 8A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BOP1
BOP1 ribosomal biogenesis factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NMD3
NMD3 ribosome export adaptor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS15
ribosomal protein S15
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOP58
NOP58 ribonucleoprotein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TSR1
TSR1 ribosome maturation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GPI
glucose-6-phosphate isomerase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0G2JLI6
- A0A2R8Y6C7
- A0A2R8YF08
- A0A2U3TZU2
- K7EIL4
- K7ELR7
- K7ENA0
- K7EP41
- K7EPY4
- K7EQ48
- K7ERC6
- K7ERK8
- P06744
- NCBI
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR1C
RNA polymerase I and III subunit C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DIMT1
DIMT1 rRNA methyltransferase and ribosome maturation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MRTO4
MRT4 homolog, ribosome maturation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
VDAC2
voltage dependent anion channel 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PUM3
pumilio RNA binding family member 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GRWD1
glutamate rich WD repeat containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RSL24D1
ribosomal L24 domain containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PUS7
pseudouridine synthase 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NIP7
nucleolar pre-rRNA processing protein NIP7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOP56
NOP56 ribonucleoprotein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DPH2
diphthamide biosynthesis 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNU13
small nuclear ribonucleoprotein 13
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX47
DEAD-box helicase 47
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDR36
WD repeat domain 36
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PES1
pescadillo ribosomal biogenesis factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WIPI2
WD repeat domain, phosphoinositide interacting 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DPH3
diphthamide biosynthesis 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000108963 | ENSG00000108963 | diphthamide biosynthesis 1 | ||
| A0A0A0MTR4 I3L1H5 I3L3X9 K7EQQ6 Q9BZG8 U3KQN3 V9GYC0 V9GYS2 | ||||
| 1801 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
23
|
MMS19 | ENSG00000155229 | MMS19 homolog, cytosolic iron-sulfur assembly component | ||
| B0QZ77 F8WCH8 H0Y746 H0Y7V3 H7C0A9 H7C1W5 Q5T454 Q96T76 | ||||
| 64210 | ||||
27
|
NSUN5 | ENSG00000130305 | NOP2/Sun RNA methyltransferase 5 | ||
| H7C2G6 Q96P11 | ||||
| 55695 | ||||
30
|
WDR3 | ENSG00000065183 | WD repeat domain 3 | ||
| Q6PDA5 Q9UNX4 | ||||
| 10885 | ||||
| Ribosome biogenesis in eukaryotes | ||||
28
|
EIF4A3 | ENSG00000141543 | eukaryotic translation initiation factor 4A3 | ||
| I3L3H2 P38919 | ||||
| 9775 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
27
|
BRIX1 | ENSG00000113460 | biogenesis of ribosomes BRX1 | ||
| Q8TDN6 | ||||
| 55299 | ||||
21
|
RBM8A | ENSG00000265241 | RNA binding motif protein 8A | ||
| A0A0J9YW13 Q9Y5S9 | ||||
| 9939 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
29
|
BOP1 | ENSG00000261236 | BOP1 ribosomal biogenesis factor | ||
| A0A075B729 Q14137 | ||||
| 23246 | ||||
29
|
NMD3 | ENSG00000169251 | NMD3 ribosome export adaptor | ||
| C9IY70 C9IZW9 C9J0B9 C9JA08 C9K0C2 Q96D46 | ||||
| 51068 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
27
|
RPS15 | ENSG00000115268 | ribosomal protein S15 | ||
| A0A0B4J2B4 A0A1Y8EIB3 K7EJ78 K7ELC2 K7EM56 K7EQJ5 P62841 S4R417 S4R456 | ||||
| 6209 | ||||
| Ribosome | ||||
27
|
NOP58 | ENSG00000055044 | NOP58 ribonucleoprotein | ||
| F8WED0 H7BZ72 Q9Y2X3 | ||||
| 51602 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
TSR1 | ENSG00000167721 | TSR1 ribosome maturation factor | ||
| I3L1Q5 I3L4E8 I3L4T0 Q2NL82 | ||||
| 55720 | ||||
24
|
GPI | ENSG00000105220 | glucose-6-phosphate isomerase | ||
| A0A0G2JLI6 A0A2R8Y6C7 A0A2R8YF08 A0A2U3TZU2 K7EIL4 K7ELR7 K7ENA0 K7EP41 K7EPY4 K7EQ48 K7ERC6 K7ERK8 P06744 | ||||
| 2821 | ||||
| Starch and sucrose metabolism Pentose phosphate pathway Glycolysis / Gluconeogenesis Carbon metabolism Amino sugar and nucleotide sugar metabolism | ||||
27
|
BUD23 | ENSG00000071462 | BUD23 rRNA methyltransferase and ribosome maturation factor | ||
| B3KR83 E9PCQ7 F2Z3D9 F8VZ18 F8W1Y1 F8WD67 F8WD87 H7C0G4 H7C170 H7C439 O43709 | ||||
| 114049 | ||||
26
|
POLR1C | ENSG00000171453 | RNA polymerase I and III subunit C | ||
| A0A2R8Y5D3 A0A2R8Y8D6 A0A2R8YEY5 A0A2R8YEZ4 D6RDJ3 E7EQB9 H0Y723 O15160 | ||||
| 9533 | ||||
| Cytosolic DNA-sensing pathway | ||||
| RNA polymerase | ||||
24
|
DIMT1 | ENSG00000086189 | DIMT1 rRNA methyltransferase and ribosome maturation factor | ||
| A0A0C4DGB1 A0A494C0G7 D6RCL3 Q9UNQ2 | ||||
| 27292 | ||||
28
|
MRTO4 | ENSG00000053372 | MRT4 homolog, ribosome maturation factor | ||
| Q9UKD2 | ||||
| 51154 | ||||
23
|
VDAC2 | ENSG00000165637 | voltage dependent anion channel 2 | ||
| A0A0A0MR02 A2A3S1 P45880 Q5JSD1 Q5JSD2 | ||||
| 7417 | ||||
| NOD-like receptor signaling pathway cGMP-PKG signaling pathway Calcium signaling pathway | ||||
29
|
PUM3 | ENSG00000080608 | pumilio RNA binding family member 3 | ||
| Q15397 S4R3K8 | ||||
| 9933 | ||||
29
|
GRWD1 | ENSG00000105447 | glutamate rich WD repeat containing 1 | ||
| M0QX71 Q9BQ67 | ||||
| 83743 | ||||
29
|
RSL24D1 | ENSG00000137876 | ribosomal L24 domain containing 1 | ||
| H3BMQ2 H3BPF2 Q9UHA3 | ||||
| 51187 | ||||
| Ribosome | ||||
25
|
PUS7 | ENSG00000091127 | pseudouridine synthase 7 | ||
| E7EUH7 H0Y863 Q96PZ0 | ||||
| 54517 | ||||
27
|
NIP7 | ENSG00000132603 | nucleolar pre-rRNA processing protein NIP7 | ||
| J3QLW7 J3QRD6 J3QRR4 Q9Y221 | ||||
| 51388 | ||||
29
|
NOP56 | ENSG00000101361 | NOP56 ribonucleoprotein | ||
| A0A494C128 H0Y653 H0YDU4 O00567 Q5JXT2 | ||||
| 10528 | ||||
| Ribosome biogenesis in eukaryotes | ||||
26
|
DPH2 | ENSG00000132768 | diphthamide biosynthesis 2 | ||
| E9PIY4 E9PJH6 E9PLL2 E9PMH7 E9PPU3 H0YCR5 H0YED1 Q9BQC3 | ||||
| 1802 | ||||
29
|
SNU13 | ENSG00000100138 | small nuclear ribonucleoprotein 13 | ||
| A0A3B3IRU2 A0A3B3ISH1 A0A3B3ISH9 A0A3B3ISK4 A0A3B3IUA2 B1AHD1 P55769 | ||||
| 4809 | ||||
| Ribosome biogenesis in eukaryotes Spliceosome | ||||
29
|
DDX47 | ENSG00000213782 | DEAD-box helicase 47 | ||
| F5H1N9 Q9H0S4 | ||||
| 51202 | ||||
27
|
WDR36 | ENSG00000134987 | WD repeat domain 36 | ||
| A0A0A0MTB8 Q8NI36 | ||||
| 134430 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
PES1 | ENSG00000100029 | pescadillo ribosomal biogenesis factor 1 | ||
| B3KXD6 B5MCF9 H7BYY8 H7C267 O00541 | ||||
| 23481 | ||||
11
|
WIPI2 | ENSG00000157954 | WD repeat domain, phosphoinositide interacting 2 | ||
| Q9Y4P8 | ||||
| 26100 | ||||
| Autophagy - animal | ||||
12
|
DPH3 | ENSG00000154813 | diphthamide biosynthesis 3 | ||
| Q96FX2 | ||||
| 285381 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 335.95 KB | |
H.sapiens_subnetwork.tsv | 80.85 KB |