- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000107036
- RIC1 homolog, RAB6A GEF…
- VPS52
- VPS52 subunit of GARP c…
- 0.990
- PPI
- SEC24D
- SEC24 homolog D, COPII …
- 0.989
- Metabolic
- COG8
- component of oligomeric…
- 0.986
- PPI
- VPS54
- VPS54 subunit of GARP c…
- 0.986
- PPI
- SEC24C
- SEC24 homolog C, COPII …
- 0.984
- Metabolic
- ATP7B
- ATPase copper transport…
- 0.980
- PPI
- COG6
- component of oligomeric…
- 0.975
- PPI
- ARFGEF1
- ADP ribosylation factor…
- 0.973
- PPI
- PIKFYVE
- phosphoinositide kinase…
- 0.973
- Complex
- USO1
- USO1 vesicle transport …
- 0.973
- Metabolic
- CLTC
- clathrin heavy chain
- 0.969
- Metabolic
- COG3
- component of oligomeric…
- 0.964
- PPI
- TRAPPC10
- trafficking protein par…
- 0.961
- Metabolic
- AP1B1
- adaptor related protein…
- 0.954
- Metabolic
- MAN2A1
- mannosidase alpha class…
- 0.952
- Metabolic
- VPS53
- VPS53 subunit of GARP c…
- 0.949
- PPI
- COG2
- component of oligomeric…
- 0.945
- PPI
- COG4
- component of oligomeric…
- 0.934
- PPI
- UBE4B
- ubiquitination factor E…
- 0.930
- Metabolic
- AP1M1
- adaptor related protein…
- 0.926
- PPI
- MAN2A2
- mannosidase alpha class…
- 0.926
- Metabolic
- VPS51
- VPS51 subunit of GARP c…
- 0.924
- Metabolic
- ARFGEF2
- ADP ribosylation factor…
- 0.921
- Metabolic
- PPP6R3
- protein phosphatase 6 r…
- 0.917
- PPI
- COPB1
- COPI coat complex subun…
- 0.916
- Metabolic
- AP1G1
- adaptor related protein…
- 0.916
- PPI
- NSF
- N-ethylmaleimide sensit…
- 0.913
- Metabolic
- ATP6V0A1
- ATPase H+ transporting …
- 0.912
- Metabolic
- SCAMP2
- secretory carrier membr…
- 0.911
- PPI
- COG1
- component of oligomeric…
- 0.903
- Metabolic
ENSG00000107036
RIC1 homolog, RAB6A GEF complex partner 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CLTC
clathrin heavy chain
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
AP1M1
adaptor related protein complex 1 subunit mu 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COPB1
COPI coat complex subunit beta 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TRAPPC10
trafficking protein particle complex 10
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ATP6V0A1
ATPase H+ transporting V0 subunit a1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SCAMP2
secretory carrier membrane protein 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COG4
component of oligomeric golgi complex 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
VPS54
VPS54 subunit of GARP complex
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COG1
component of oligomeric golgi complex 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COG8
component of oligomeric golgi complex 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SEC24D
SEC24 homolog D, COPII coat complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COG3
component of oligomeric golgi complex 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COG6
component of oligomeric golgi complex 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COG2
component of oligomeric golgi complex 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MAN2A2
mannosidase alpha class 2A member 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0C4DGL1
- H0YK77
- H0YKH9
- H0YKM7
- H0YKQ2
- H0YKT0
- H0YL67
- H0YLB9
- H0YLL4
- H0YLU3
- H0YML7
- H0YMU0
- H0YNC8
- H0YNG5
- P49641
- NCBI
VPS51
VPS51 subunit of GARP complex
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
AP1G1
adaptor related protein complex 1 subunit gamma 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MAN2A1
mannosidase alpha class 2A member 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
VPS52
VPS52 subunit of GARP complex
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
USO1
USO1 vesicle transport factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PIKFYVE
phosphoinositide kinase, FYVE-type zinc finger containing
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
AP1B1
adaptor related protein complex 1 subunit beta 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
VPS53
VPS53 subunit of GARP complex
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPP6R3
protein phosphatase 6 regulatory subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ATP7B
ATPase copper transporting beta
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ARFGEF2
ADP ribosylation factor guanine nucleotide exchange factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UBE4B
ubiquitination factor E4B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SEC24C
SEC24 homolog C, COPII coat complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
CLTC | ENSG00000141367 | clathrin heavy chain | ||
| A0A087WVQ6 J3KRF5 J3KS13 J3KSQ2 J3KTN1 J3QL20 K7EJJ5 Q00610 | ||||
| 1213 | ||||
| Synaptic vesicle cycle | ||||
| Endocytosis Lysosome | ||||
29
|
NSF | ENSG00000073969 | N-ethylmaleimide sensitive factor, vesicle fusing ATPase | ||
| I3L0L3 I3L0N3 I3L2G1 I3L338 I3L4Q9 K7EQD6 P46459 | ||||
| 4905 | ||||
| Synaptic vesicle cycle GABAergic synapse | ||||
28
|
AP1M1 | ENSG00000072958 | adaptor related protein complex 1 subunit mu 1 | ||
| A0A087WZX7 E7ENJ6 K7EJL1 K7ENA7 K7EPJ8 K7EQ90 K7EQX3 K7ER75 Q9BXS5 | ||||
| 8907 | ||||
| Lysosome | ||||
30
|
COPB1 | ENSG00000129083 | COPI coat complex subunit beta 1 | ||
| E9PKQ1 E9PP63 E9PP73 P53618 | ||||
| 1315 | ||||
28
|
TRAPPC10 | ENSG00000160218 | trafficking protein particle complex 10 | ||
| F8WE24 P48553 | ||||
| 7109 | ||||
28
|
ATP6V0A1 | ENSG00000033627 | ATPase H+ transporting V0 subunit a1 | ||
| B7Z2A9 B7Z641 F5H1T6 K7ELZ6 K7EM24 K7EN36 K7ENA1 K7EPG4 K7EQW2 K7ERA0 K7ERA6 Q93050 | ||||
| 535 | ||||
| Synaptic vesicle cycle | ||||
| Oxidative phosphorylation Phagosome Lysosome | ||||
18
|
SCAMP2 | ENSG00000140497 | secretory carrier membrane protein 2 | ||
| H3BMN2 H3BN93 H3BPL9 H3BQW2 H3BUB6 H3BV04 O15127 | ||||
| 10066 | ||||
20
|
COG4 | ENSG00000103051 | component of oligomeric golgi complex 4 | ||
| A0A0A0MS45 E9PRT5 H3BMV9 H3BQB2 H3BSD2 J3KNI1 J3KRB5 J3QLW1 Q9H9E3 | ||||
| 25839 | ||||
29
|
VPS54 | ENSG00000143952 | VPS54 subunit of GARP complex | ||
| A0A0A0MT48 Q9P1Q0 | ||||
| 51542 | ||||
26
|
COG1 | ENSG00000166685 | component of oligomeric golgi complex 1 | ||
| A0A087WVI0 E9PBL8 J3KRP4 J3KSY3 J3QKY9 J3QLT5 Q8WTW3 | ||||
| 9382 | ||||
27
|
COG8 | ENSG00000213380 | component of oligomeric golgi complex 8 | ||
| A0A087X1T3 B4DYU2 H3BQV3 H3BSH5 J3QRV3 Q96MW5 | ||||
| 84342 | ||||
30
|
ARFGEF1 | ENSG00000066777 | ADP ribosylation factor guanine nucleotide exchange factor 1 | ||
| E5RHL7 E5RHZ1 E5RIF2 E5RJN9 Q9Y6D6 | ||||
| 10565 | ||||
| Endocytosis | ||||
29
|
SEC24D | ENSG00000150961 | SEC24 homolog D, COPII coat complex component | ||
| D6RAE2 D6RBM1 D6RGJ5 E9PC44 E9PDM8 E9PG84 O94855 | ||||
| 9871 | ||||
| Protein processing in endoplasmic reticulum | ||||
30
|
COG3 | ENSG00000136152 | component of oligomeric golgi complex 3 | ||
| A0A087WTH9 A0A087WYY9 Q96JB2 | ||||
| 83548 | ||||
28
|
COG6 | ENSG00000133103 | component of oligomeric golgi complex 6 | ||
| F5GX38 F5GX76 H0YGX8 Q9Y2V7 | ||||
| 57511 | ||||
25
|
COG2 | ENSG00000135775 | component of oligomeric golgi complex 2 | ||
| B7Z2Y2 Q14746 V9GY21 | ||||
| 22796 | ||||
23
|
MAN2A2 | ENSG00000196547 | mannosidase alpha class 2A member 2 | ||
| A0A0C4DGL1 H0YK77 H0YKH9 H0YKM7 H0YKQ2 H0YKT0 H0YL67 H0YLB9 H0YLL4 H0YLU3 H0YML7 H0YMU0 H0YNC8 H0YNG5 P49641 | ||||
| 4122 | ||||
| N-Glycan biosynthesis Various types of N-glycan biosynthesis | ||||
26
|
VPS51 | ENSG00000149823 | VPS51 subunit of GARP complex | ||
| A0A1W2PQZ2 E9PJ36 E9PKE5 E9PKX7 E9PMB6 E9PQD5 E9PQN6 E9PRV0 H0YCB7 H0YDX9 H0YEE1 Q9UID3 | ||||
| 738 | ||||
30
|
AP1G1 | ENSG00000166747 | adaptor related protein complex 1 subunit gamma 1 | ||
| B3KNW1 B4DGE1 H3BN71 H3BN75 H3BNN2 H3BNR4 H3BPN9 H3BR36 H3BRM7 H3BS13 H3BUN9 H3BV30 O43747 | ||||
| 164 | ||||
| Lysosome | ||||
25
|
MAN2A1 | ENSG00000112893 | mannosidase alpha class 2A member 1 | ||
| Q16706 | ||||
| 4124 | ||||
| N-Glycan biosynthesis Various types of N-glycan biosynthesis | ||||
29
|
VPS52 | ENSG00000223501 | VPS52 subunit of GARP complex | ||
| E9PI03 Q8N1B4 | ||||
| 6293 | ||||
27
|
USO1 | ENSG00000138768 | USO1 vesicle transport factor | ||
| O60763 | ||||
| 8615 | ||||
24
|
PIKFYVE | ENSG00000115020 | phosphoinositide kinase, FYVE-type zinc finger containing | ||
| C9JL08 E9PDH4 F8WEZ0 Q9Y2I7 | ||||
| 200576 | ||||
| Phosphatidylinositol signaling system | ||||
| Phagosome Inositol phosphate metabolism | ||||
30
|
AP1B1 | ENSG00000100280 | adaptor related protein complex 1 subunit beta 1 | ||
| C9J1E7 H7C034 Q10567 | ||||
| 162 | ||||
| Lysosome | ||||
27
|
VPS53 | ENSG00000141252 | VPS53 subunit of GARP complex | ||
| E7EVT8 F6VX93 I3L0S6 I3L184 I3L1W6 I3L4P9 Q5VIR6 | ||||
| 55275 | ||||
23
|
PPP6R3 | ENSG00000110075 | protein phosphatase 6 regulatory subunit 3 | ||
| A0A1D5RMU2 E9PJD8 E9PK08 E9PKF6 E9PKG4 E9PNN8 E9PQP7 H0YDK9 H0YDW1 H0YEN2 H0YEV0 H7BXH2 Q5H9R7 | ||||
| 55291 | ||||
20
|
ATP7B | ENSG00000123191 | ATPase copper transporting beta | ||
| A0A0U1RQY8 A0A0U1RRG1 B7ZLR4 E7ET55 F5H562 F5H748 P35670 | ||||
| 540 | ||||
30
|
ARFGEF2 | ENSG00000124198 | ADP ribosylation factor guanine nucleotide exchange factor 2 | ||
| Q9Y6D5 | ||||
| 10564 | ||||
| Endocytosis | ||||
21
|
UBE4B | ENSG00000130939 | ubiquitination factor E4B | ||
| B1AQ61 K7EP75 K7ERA7 O95155 | ||||
| 10277 | ||||
| Ubiquitin mediated proteolysis Protein processing in endoplasmic reticulum | ||||
30
|
SEC24C | ENSG00000176986 | SEC24 homolog C, COPII coat complex component | ||
| A0A0U1RR49 A0A0U1RR58 G5EA31 P53992 | ||||
| 9632 | ||||
| Protein processing in endoplasmic reticulum |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 300.47 KB | |
H.sapiens_subnetwork.tsv | 78.49 KB |