Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000100359
- small G protein signali…
- PDCD6IP
- programmed cell death 6…
- 0.995
- PPI
- RAB5C
- RAB5C, member RAS oncog…
- 0.860
- PPI
- RPL35
- ribosomal protein L35
- 0.842
- PPI
- RAB5A
- RAB5A, member RAS oncog…
- 0.809
- PPI
- BSDC1
- BSD domain containing 1
- 0.806
- PPI
- SMARCC1
- SWI/SNF related, matrix…
- 0.769
- Complex
- NF2
- neurofibromin 2
- 0.737
- PPI
- SMARCD1
- SWI/SNF related, matrix…
- 0.710
- Complex
- CHRM3
- cholinergic receptor mu…
- 0.666
- PPI
- IQGAP1
- IQ motif containing GTP…
- 0.616
- Metabolic
- BCL7B
- BAF chromatin remodelin…
- 0.492
- Complex
- SNX12
- sorting nexin 12
- 0.464
- Metabolic
- LEMD2
- LEM domain nuclear enve…
- 0.461
- Complex
- XRCC1
- X-ray repair cross comp…
- 0.420
- PPI
Subnetwork gene interactions
ENSG00000100359
small G protein signaling modulator 3
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PDCD6IP
programmed cell death 6 interacting protein
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BSDC1
BSD domain containing 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAB5C
RAB5C, member RAS oncogene family
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL35
ribosomal protein L35
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCD1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NF2
neurofibromin 2
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAB5A
RAB5A, member RAS oncogene family
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNX12
sorting nexin 12
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
XRCC1
X-ray repair cross complementing 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CHRM3
cholinergic receptor muscarinic 3
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LEMD2
LEM domain nuclear envelope protein 2
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
IQGAP1
IQ motif containing GTPase activating protein 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
5
|
PDCD6IP | ENSG00000170248 | programmed cell death 6 interacting protein | ||
| A0A3B3IT07 C9IZF9 F8WBR8 F8WDK9 F8WEQ7 Q8WUM4 | ||||
| 10015 | ||||
| Endocytosis | ||||
3
|
BSDC1 | ENSG00000160058 | BSD domain containing 1 | ||
| E9PNA9 E9PQA7 E9PS77 F8W6C6 Q9NW68 | ||||
| 55108 | ||||
7
|
RAB5C | ENSG00000108774 | RAB5C, member RAS oncogene family | ||
| F8VSF8 F8VVK3 F8VWU4 K7ENY4 P51148 | ||||
| 5878 | ||||
| Ras signaling pathway | ||||
| Phagosome Endocytosis | ||||
5
|
RPL35 | ENSG00000136942 | ribosomal protein L35 | ||
| F2Z388 P42766 | ||||
| 11224 | ||||
| Ribosome | ||||
5
|
SMARCD1 | ENSG00000066117 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 | ||
| F8VRQ4 F8VUB0 F8VW95 F8VZ70 H0YHV1 Q96GM5 | ||||
| 6602 | ||||
4
|
NF2 | ENSG00000186575 | neurofibromin 2 | ||
| A0A5F9ZHA0 A0A5F9ZHD8 A0A5K1VW66 P35240 | ||||
| 4771 | ||||
| Tight junction Hippo signaling pathway - multiple species Hippo signaling pathway | ||||
7
|
RAB5A | ENSG00000144566 | RAB5A, member RAS oncogene family | ||
| C9J3X8 F8WCY6 F8WD79 P20339 | ||||
| 5868 | ||||
| Ras signaling pathway | ||||
| Phagosome Endocytosis | ||||
6
|
SMARCC1 | ENSG00000173473 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 | ||
| F8WE13 Q92922 | ||||
| 6599 | ||||
4
|
SNX12 | ENSG00000147164 | sorting nexin 12 | ||
| A0A087X0R6 Q9UMY4 | ||||
| 29934 | ||||
| Endocytosis | ||||
5
|
XRCC1 | ENSG00000073050 | X-ray repair cross complementing 1 | ||
| F5H8D7 M0QYS5 M0QZ96 M0R0D2 M0R1U8 P18887 | ||||
| 7515 | ||||
| Base excision repair | ||||
1
|
CHRM3 | ENSG00000133019 | cholinergic receptor muscarinic 3 | ||
| B1AN12 P20309 | ||||
| 1131 | ||||
| Taste transduction Calcium signaling pathway Cholinergic synapse Neuroactive ligand-receptor interaction | ||||
2
|
LEMD2 | ENSG00000161904 | LEM domain nuclear envelope protein 2 | ||
| D6R958 D6RBV0 H0Y8H8 H0Y9B7 H7C2Z0 Q8NC56 | ||||
| 221496 | ||||
7
|
IQGAP1 | ENSG00000140575 | IQ motif containing GTPase activating protein 1 | ||
| A0A087WWP1 A0A087X225 A0A0J9YXZ5 H0YKA5 H0YLE8 P46940 | ||||
| 8826 | ||||
| Adherens junction | ||||
3
|
BCL7B | ENSG00000106635 | BAF chromatin remodeling complex subunit BCL7B | ||
| F2Z3H6 F8WDZ4 F8WE18 Q9BQE9 | ||||
| 9275 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
- Use as query
- Add to current query
jSquid_subnetworks.xml | 145.15 KB | |
H.sapiens_subnetwork.tsv | 7.30 KB |