- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000099622
- cold inducible RNA bind…
- HNRNPK
- heterogeneous nuclear r…
- 1.000
- PPI
- PRMT1
- protein arginine methyl…
- 0.999
- PPI
- HNRNPA0
- heterogeneous nuclear r…
- 0.999
- PPI
- HNRNPA1
- heterogeneous nuclear r…
- 0.998
- PPI
- NOP56
- NOP56 ribonucleoprotein
- 0.995
- Complex
- SNRPA
- small nuclear ribonucle…
- 0.994
- PPI
- RING1
- ring finger protein 1
- 0.983
- Complex
- NCL
- nucleolin
- 0.968
- Metabolic
- LARP7
- La ribonucleoprotein 7,…
- 0.963
- PPI
- KHDRBS1
- KH RNA binding domain c…
- 0.933
- PPI
- SNU13
- small nuclear ribonucle…
- 0.927
- Metabolic
- SCAF8
- SR-related CTD associat…
- 0.924
- Complex
- NCBP1
- nuclear cap binding pro…
- 0.909
- Metabolic
- EIF4A3
- eukaryotic translation …
- 0.908
- Metabolic
- NGRN
- neugrin, neurite outgro…
- 0.901
- PPI
- CDK9
- cyclin dependent kinase…
- 0.887
- Metabolic
- PABPC1
- poly(A) binding protein…
- 0.884
- Complex
- DDX5
- DEAD-box helicase 5
- 0.879
- Complex
- DDX19A
- DEAD-box helicase 19A
- 0.870
- Metabolic
- DNAJB6
- DnaJ heat shock protein…
- 0.867
- Complex
- SRSF5
- serine and arginine ric…
- 0.862
- Complex
- WDR43
- WD repeat domain 43
- 0.847
- Complex
- U2AF1
- U2 small nuclear RNA au…
- 0.844
- Metabolic
- LSM2
- LSM2 homolog, U6 small …
- 0.844
- Metabolic
- PAPOLA
- poly(A) polymerase alpha
- 0.818
- PPI
- RACK1
- receptor for activated …
- 0.817
- Metabolic
- DDX21
- DExD-box helicase 21
- 0.814
- Metabolic
- EIF4E
- eukaryotic translation …
- 0.810
- PPI
- FUS
- FUS RNA binding protein
- 0.791
- Metabolic
- LYAR
- Ly1 antibody reactive
- 0.787
- PPI
ENSG00000099622
cold inducible RNA binding protein
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- Ensembl
- UniProt
- D6W5Y5
- F6WMK9
- K7EIF7
- K7EJV1
- K7EJV5
- K7ELL4
- K7ELT6
- K7ELV6
- K7EMY9
- K7ENN6
- K7ENX8
- K7EPM4
- K7EQL0
- K7EQR7
- K7EQX4
- K7ER40
- Q14011
- NCBI
SCAF8
SR-related CTD associated factor 8
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- Use pair as query
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- Ensembl
- UniProt
- NCBI
DDX5
DEAD-box helicase 5
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- Ensembl
- UniProt
- A0A0G2JLI4
- J3KRX8
- J3KRZ1
- J3KTA4
- J3KTQ4
- J3QKN9
- J3QLG9
- J3QR02
- J3QR62
- J3QRN5
- J3QRQ7
- J3QS79
- J3QS97
- J3QSF1
- K7EKV0
- P17844
- X6RLV5
- NCBI
HNRNPA1
heterogeneous nuclear ribonucleoprotein A1
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- Ensembl
- UniProt
- NCBI
SNRPA
small nuclear ribonucleoprotein polypeptide A
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- Ensembl
- UniProt
- NCBI
NOP56
NOP56 ribonucleoprotein
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- Ensembl
- UniProt
- NCBI
NCL
nucleolin
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- Ensembl
- UniProt
- NCBI
EIF4A3
eukaryotic translation initiation factor 4A3
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- Ensembl
- UniProt
- NCBI
DDX21
DExD-box helicase 21
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- Ensembl
- UniProt
- NCBI
SNU13
small nuclear ribonucleoprotein 13
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- Ensembl
- UniProt
- NCBI
U2AF1
U2 small nuclear RNA auxiliary factor 1
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- Ensembl
- UniProt
- NCBI
LARP7
La ribonucleoprotein 7, transcriptional regulator
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- Ensembl
- UniProt
- NCBI
FUS
FUS RNA binding protein
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- Ensembl
- UniProt
- NCBI
NCBP1
nuclear cap binding protein subunit 1
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- Ensembl
- UniProt
- NCBI
EIF4E
eukaryotic translation initiation factor 4E
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- Ensembl
- UniProt
- NCBI
WDR43
WD repeat domain 43
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- Add to current query
- Ensembl
- UniProt
- NCBI
RACK1
receptor for activated C kinase 1
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- Ensembl
- UniProt
- D6R909
- D6R9L0
- D6R9Z1
- D6RAC2
- D6RAU2
- D6RBD0
- D6RDI0
- D6REE5
- D6RF23
- D6RFX4
- D6RFZ9
- D6RGK8
- D6RHH4
- D6RHJ5
- E9PD14
- H0Y8R5
- H0Y8W2
- H0Y9P0
- H0YAF8
- H0YAM7
- J3KPE3
- P63244
- NCBI
LYAR
Ly1 antibody reactive
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- Ensembl
- UniProt
- NCBI
PRMT1
protein arginine methyltransferase 1
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- Ensembl
- UniProt
- NCBI
DDX19A
DEAD-box helicase 19A
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- Ensembl
- UniProt
- NCBI
HNRNPA0
heterogeneous nuclear ribonucleoprotein A0
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- Ensembl
- UniProt
- NCBI
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1
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- Ensembl
- UniProt
- NCBI
SRSF5
serine and arginine rich splicing factor 5
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- Ensembl
- UniProt
- NCBI
CDK9
cyclin dependent kinase 9
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- Ensembl
- UniProt
- NCBI
PABPC1
poly(A) binding protein cytoplasmic 1
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- Ensembl
- UniProt
- A0A087WTT1
- E5RFD8
- E5RGC4
- E5RGH3
- E5RH24
- E5RHG7
- E5RJB9
- E5RJM8
- E7EQV3
- E7ERJ7
- H0YAP2
- H0YAR2
- H0YAS6
- H0YAS7
- H0YAW6
- H0YB75
- H0YB86
- H0YBN4
- H0YC10
- P11940
- NCBI
RING1
ring finger protein 1
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
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- Use pair as query
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- Ensembl
- UniProt
- NCBI
DNAJB6
DnaJ heat shock protein family (Hsp40) member B6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAPOLA
poly(A) polymerase alpha
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPK
heterogeneous nuclear ribonucleoprotein K
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NGRN
neugrin, neurite outgrowth associated
- Use as query
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- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
13
|
SCAF8 | ENSG00000213079 | SR-related CTD associated factor 8 | ||
| A0A0A0MT33 Q9UPN6 | ||||
| 22828 | ||||
25
|
DDX5 | ENSG00000108654 | DEAD-box helicase 5 | ||
| A0A0G2JLI4 J3KRX8 J3KRZ1 J3KTA4 J3KTQ4 J3QKN9 J3QLG9 J3QR02 J3QR62 J3QRN5 J3QRQ7 J3QS79 J3QS97 J3QSF1 K7EKV0 P17844 X6RLV5 | ||||
| 1655 | ||||
| Spliceosome | ||||
24
|
HNRNPA1 | ENSG00000135486 | heterogeneous nuclear ribonucleoprotein A1 | ||
| F8VTQ5 F8VYN5 F8VZ49 F8W646 F8W6I7 H0YH80 P09651 | ||||
| 3178 | ||||
| Spliceosome | ||||
17
|
SNRPA | ENSG00000077312 | small nuclear ribonucleoprotein polypeptide A | ||
| M0QXK2 M0QZG7 M0R0G9 M0R221 M0R268 M0R2B8 P09012 | ||||
| 6626 | ||||
| Spliceosome | ||||
25
|
NOP56 | ENSG00000101361 | NOP56 ribonucleoprotein | ||
| A0A494C128 H0Y653 H0YDU4 O00567 Q5JXT2 | ||||
| 10528 | ||||
| Ribosome biogenesis in eukaryotes | ||||
24
|
NCL | ENSG00000115053 | nucleolin | ||
| C9J1H7 C9JLB1 C9JWL1 C9JYW2 H7BY16 P19338 | ||||
| 4691 | ||||
28
|
EIF4A3 | ENSG00000141543 | eukaryotic translation initiation factor 4A3 | ||
| I3L3H2 P38919 | ||||
| 9775 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
20
|
DDX21 | ENSG00000165732 | DExD-box helicase 21 | ||
| Q9NR30 | ||||
| 9188 | ||||
24
|
SNU13 | ENSG00000100138 | small nuclear ribonucleoprotein 13 | ||
| A0A3B3IRU2 A0A3B3ISH1 A0A3B3ISH9 A0A3B3ISK4 A0A3B3IUA2 B1AHD1 P55769 | ||||
| 4809 | ||||
| Ribosome biogenesis in eukaryotes Spliceosome | ||||
25
|
U2AF1 | ENSG00000160201 | U2 small nuclear RNA auxiliary factor 1 | ||
| A0A1B0GW87 Q01081 | ||||
| 102724594 7307 | ||||
| Spliceosome | ||||
22
|
LARP7 | ENSG00000174720 | La ribonucleoprotein 7, transcriptional regulator | ||
| D6R9Z6 D6RAF3 D6RBH8 D6RF22 D6RF49 D6RFF0 H0YA82 Q4G0J3 | ||||
| 51574 | ||||
22
|
FUS | ENSG00000089280 | FUS RNA binding protein | ||
| H3BNZ4 H3BPE7 P35637 | ||||
| 2521 | ||||
25
|
NCBP1 | ENSG00000136937 | nuclear cap binding protein subunit 1 | ||
| F2Z2T1 Q09161 X6R941 | ||||
| 4686 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
17
|
EIF4E | ENSG00000151247 | eukaryotic translation initiation factor 4E | ||
| D6RBW1 D6RFJ3 H0Y8J7 P06730 | ||||
| 1977 | ||||
| HIF-1 signaling pathway PI3K-Akt signaling pathway mTOR signaling pathway Insulin signaling pathway | ||||
| RNA transport | ||||
23
|
WDR43 | ENSG00000163811 | WD repeat domain 43 | ||
| C9IZK7 C9JEE7 C9JH61 Q15061 | ||||
| 23160 | ||||
| Ribosome biogenesis in eukaryotes | ||||
26
|
RACK1 | ENSG00000204628 | receptor for activated C kinase 1 | ||
| D6R909 D6R9L0 D6R9Z1 D6RAC2 D6RAU2 D6RBD0 D6RDI0 D6REE5 D6RF23 D6RFX4 D6RFZ9 D6RGK8 D6RHH4 D6RHJ5 E9PD14 H0Y8R5 H0Y8W2 H0Y9P0 H0YAF8 H0YAM7 J3KPE3 P63244 | ||||
| 10399 | ||||
14
|
LYAR | ENSG00000145220 | Ly1 antibody reactive | ||
| D6RDJ1 Q9NX58 | ||||
| 55646 | ||||
23
|
PRMT1 | ENSG00000126457 | protein arginine methyltransferase 1 | ||
| E9PIE2 E9PIX6 E9PKG1 E9PMW9 E9PMZ2 E9PNR9 E9PQ98 H0YDE4 Q99873 | ||||
| 3276 | ||||
| FoxO signaling pathway Glucagon signaling pathway | ||||
19
|
DDX19A | ENSG00000168872 | DEAD-box helicase 19A | ||
| H3BP36 H3BP50 H3BSL8 H3BTB3 I3L0H8 I3L352 J3QRH0 Q9NUU7 | ||||
| 55308 | ||||
24
|
HNRNPA0 | ENSG00000177733 | heterogeneous nuclear ribonucleoprotein A0 | ||
| Q13151 | ||||
| 10949 | ||||
14
|
KHDRBS1 | ENSG00000121774 | KH RNA binding domain containing, signal transduction associated 1 | ||
| Q07666 | ||||
| 10657 | ||||
13
|
SRSF5 | ENSG00000100650 | serine and arginine rich splicing factor 5 | ||
| B4DJK0 B4DUA4 G3V5K8 Q13243 | ||||
| 6430 | ||||
| Spliceosome | ||||
15
|
CDK9 | ENSG00000136807 | cyclin dependent kinase 9 | ||
| P50750 X6RE90 | ||||
| 1025 | ||||
23
|
PABPC1 | ENSG00000070756 | poly(A) binding protein cytoplasmic 1 | ||
| A0A087WTT1 E5RFD8 E5RGC4 E5RGH3 E5RH24 E5RHG7 E5RJB9 E5RJM8 E7EQV3 E7ERJ7 H0YAP2 H0YAR2 H0YAS6 H0YAS7 H0YAW6 H0YB75 H0YB86 H0YBN4 H0YC10 P11940 | ||||
| 26986 | ||||
| RNA degradation RNA transport mRNA surveillance pathway | ||||
6
|
RING1 | ENSG00000204227 | ring finger protein 1 | ||
| Q06587 | ||||
| 6015 | ||||
22
|
LSM2 | ENSG00000204392 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| Q9Y333 | ||||
| 57819 | ||||
| RNA degradation Spliceosome | ||||
3
|
DNAJB6 | ENSG00000105993 | DnaJ heat shock protein family (Hsp40) member B6 | ||
| A0A0J9YX62 C9J2C4 C9J2P2 C9JB42 C9JDR7 C9JDX6 C9JN01 E9PH18 F8WCZ4 O75190 | ||||
| 10049 | ||||
10
|
PAPOLA | ENSG00000090060 | poly(A) polymerase alpha | ||
| A0A0C4DGK1 G3V3I9 G3V457 G3XAH6 H0YJ00 H0YJL4 P51003 | ||||
| 10914 | ||||
| mRNA surveillance pathway | ||||
22
|
HNRNPK | ENSG00000165119 | heterogeneous nuclear ribonucleoprotein K | ||
| P61978 Q5T6W2 S4R359 S4R457 | ||||
| 3190 | ||||
| Spliceosome | ||||
2
|
NGRN | ENSG00000182768 | neugrin, neurite outgrowth associated | ||
| A0A087WWE0 Q9NPE2 | ||||
| 51335 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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- Use as query
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jSquid_subnetworks.xml | 301.51 KB | |
H.sapiens_subnetwork.tsv | 53.63 KB |