- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000088038
- CCR4-NOT transcription …
- CNOT7
- CCR4-NOT transcription …
- 1.000
- PPI
- CNOT1
- CCR4-NOT transcription …
- 1.000
- PPI
- CNOT8
- CCR4-NOT transcription …
- 1.000
- PPI
- CNOT2
- CCR4-NOT transcription …
- 1.000
- PPI
- CNOT9
- CCR4-NOT transcription …
- 1.000
- PPI
- CNOT6
- CCR4-NOT transcription …
- 1.000
- PPI
- CNOT6L
- CCR4-NOT transcription …
- 1.000
- PPI
- PAN2
- poly(A) specific ribonu…
- 1.000
- PPI
- SOX3
- SRY-box transcription f…
- 0.999
- PPI
- CNOT4
- CCR4-NOT transcription …
- 0.997
- PPI
- TNRC6B
- trinucleotide repeat co…
- 0.997
- PPI
- TNRC6C
- trinucleotide repeat co…
- 0.996
- PPI
- XPO1
- exportin 1
- 0.996
- PPI
- CNOT10
- CCR4-NOT transcription …
- 0.996
- PPI
- TOP2A
- DNA topoisomerase II al…
- 0.988
- Metabolic
- POLR2E
- RNA polymerase II subun…
- 0.988
- Metabolic
- PATL1
- PAT1 homolog 1, process…
- 0.984
- PPI
- TAF6
- TATA-box binding protei…
- 0.983
- PPI
- POLR2A
- RNA polymerase II subun…
- 0.978
- PPI
- SRRM1
- serine and arginine rep…
- 0.977
- PPI
- CCT6A
- chaperonin containing T…
- 0.976
- Complex
- NXF1
- nuclear RNA export fact…
- 0.968
- Metabolic
- CCNL2
- cyclin L2
- 0.966
- Metabolic
- RPTOR
- regulatory associated p…
- 0.958
- Metabolic
- TOP2B
- DNA topoisomerase II be…
- 0.946
- Metabolic
- KPNB1
- karyopherin subunit bet…
- 0.944
- Metabolic
- RAD23A
- RAD23 homolog A, nucleo…
- 0.937
- Metabolic
- PRMT1
- protein arginine methyl…
- 0.934
- Metabolic
- PATL2
- PAT1 homolog 2
- 0.934
- PPI
- TAF5
- TATA-box binding protei…
- 0.926
- Complex
ENSG00000088038
CCR4-NOT transcription complex subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAD23A
RAD23 homolog A, nucleotide excision repair protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CNOT7
CCR4-NOT transcription complex subunit 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TNRC6C
trinucleotide repeat containing adaptor 6C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PATL1
PAT1 homolog 1, processing body mRNA decay factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
XPO1
exportin 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPTOR
regulatory associated protein of MTOR complex 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PATL2
PAT1 homolog 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CCNL2
cyclin L2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2A
RNA polymerase II subunit A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CNOT9
CCR4-NOT transcription complex subunit 9
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CCT6A
chaperonin containing TCP1 subunit 6A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NXF1
nuclear RNA export factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TOP2A
DNA topoisomerase II alpha
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CNOT2
CCR4-NOT transcription complex subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A087X050
- F8VP97
- F8VPX5
- F8VQD8
- F8VQF4
- F8VRJ3
- F8VRS8
- F8VS14
- F8VSK9
- F8VUB4
- F8VV05
- F8VV52
- F8VVD4
- F8VVY1
- F8VWH8
- F8VX63
- F8W145
- H0YH84
- H0YHT6
- H0YHT8
- H0YI11
- H0YI80
- Q9NZN8
- NCBI
CNOT8
CCR4-NOT transcription complex subunit 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TOP2B
DNA topoisomerase II beta
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2E
RNA polymerase II subunit E
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CNOT6
CCR4-NOT transcription complex subunit 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CNOT6L
CCR4-NOT transcription complex subunit 6 like
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CNOT4
CCR4-NOT transcription complex subunit 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CNOT1
CCR4-NOT transcription complex subunit 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
KPNB1
karyopherin subunit beta 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TAF5
TATA-box binding protein associated factor 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TAF6
TATA-box binding protein associated factor 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAN2
poly(A) specific ribonuclease subunit PAN2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TNRC6B
trinucleotide repeat containing adaptor 6B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CNOT10
CCR4-NOT transcription complex subunit 10
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRRM1
serine and arginine repetitive matrix 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRMT1
protein arginine methyltransferase 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SOX3
SRY-box transcription factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000088038 | ENSG00000088038 | CCR4-NOT transcription complex subunit 3 | ||
| A0A087X0F9 A0A2R8Y4W0 A0A2R8Y691 A0A2R8Y6N5 A0A2R8Y7Z8 B7Z6J7 H0Y5X7 H7C148 H7C3F5 H7C5J4 O75175 | ||||
| 4849 | ||||
| RNA degradation |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
19
|
RAD23A | ENSG00000179262 | RAD23 homolog A, nucleotide excision repair protein | ||
| A0A494C0B4 K7ELU6 K7ELW1 K7ENJ0 K7EQ16 P54725 | ||||
| 5886 | ||||
| Protein processing in endoplasmic reticulum Nucleotide excision repair | ||||
26
|
CNOT7 | ENSG00000198791 | CCR4-NOT transcription complex subunit 7 | ||
| E5RGA8 E5RGH2 E5RHV9 E5RJE0 H0YAV9 H0YBT3 Q9UIV1 | ||||
| 29883 | ||||
| RNA degradation | ||||
15
|
TNRC6C | ENSG00000078687 | trinucleotide repeat containing adaptor 6C | ||
| A0A1B0GU24 K7EKN9 K7ELY5 Q9HCJ0 | ||||
| 57690 | ||||
21
|
PATL1 | ENSG00000166889 | PAT1 homolog 1, processing body mRNA decay factor | ||
| Q86TB9 | ||||
| 219988 | ||||
| RNA degradation | ||||
27
|
XPO1 | ENSG00000082898 | exportin 1 | ||
| C9IYM2 C9IZS4 C9J673 C9JF49 C9JKM9 C9JQ02 C9JV99 F8WF71 H7BZC5 O14980 | ||||
| 7514 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
16
|
RPTOR | ENSG00000141564 | regulatory associated protein of MTOR complex 1 | ||
| I3L2I3 I3L436 Q8N122 | ||||
| 57521 | ||||
| AMPK signaling pathway PI3K-Akt signaling pathway mTOR signaling pathway Insulin signaling pathway | ||||
| Autophagy - animal | ||||
10
|
PATL2 | ENSG00000229474 | PAT1 homolog 2 | ||
| C9JE40 H0YMQ2 H0YMS5 H0YN77 H0YNY1 | ||||
| 197135 | ||||
14
|
CCNL2 | ENSG00000221978 | cyclin L2 | ||
| A0A0A0MSF3 C9J148 J3KRL1 J3QSH2 Q96S94 | ||||
| 81669 | ||||
19
|
POLR2A | ENSG00000181222 | RNA polymerase II subunit A | ||
| A0A590UJN4 A0A590UKB6 P24928 | ||||
| 5430 | ||||
| RNA polymerase | ||||
19
|
CNOT9 | ENSG00000144580 | CCR4-NOT transcription complex subunit 9 | ||
| F8WBZ6 F8WCV7 H7C0W0 Q92600 | ||||
| 9125 | ||||
| RNA degradation | ||||
19
|
CCT6A | ENSG00000146731 | chaperonin containing TCP1 subunit 6A | ||
| P40227 | ||||
| 908 | ||||
19
|
NXF1 | ENSG00000162231 | nuclear RNA export factor 1 | ||
| B4E227 E9PIN3 E9PLA7 E9PMV7 E9PQA4 H0YDU0 Q9UBU9 | ||||
| 10482 | ||||
| Ribosome biogenesis in eukaryotes RNA transport mRNA surveillance pathway | ||||
19
|
TOP2A | ENSG00000131747 | DNA topoisomerase II alpha | ||
| J3KTB7 J3QR57 P11388 | ||||
| 7153 | ||||
22
|
CNOT2 | ENSG00000111596 | CCR4-NOT transcription complex subunit 2 | ||
| A0A087X050 F8VP97 F8VPX5 F8VQD8 F8VQF4 F8VRJ3 F8VRS8 F8VS14 F8VSK9 F8VUB4 F8VV05 F8VV52 F8VVD4 F8VVY1 F8VWH8 F8VX63 F8W145 H0YH84 H0YHT6 H0YHT8 H0YI11 H0YI80 Q9NZN8 | ||||
| 4848 | ||||
| RNA degradation | ||||
21
|
CNOT8 | ENSG00000155508 | CCR4-NOT transcription complex subunit 8 | ||
| B7Z9U0 E5RFJ4 E5RGE4 E5RHD6 E5RHG0 E5RHL9 E5RHP3 E5RIL2 E5RIU0 E5RJC5 Q9UFF9 | ||||
| 9337 | ||||
| RNA degradation | ||||
19
|
TOP2B | ENSG00000077097 | DNA topoisomerase II beta | ||
| E9PCY5 H7BZ82 Q02880 | ||||
| 7155 | ||||
15
|
POLR2E | ENSG00000099817 | RNA polymerase II subunit E | ||
| A0A087WVN5 A0A087WVZ9 A0A087WWX0 A0A0A0MQR7 K7EJ87 K7EQN2 P19388 | ||||
| 5434 | ||||
| Cytosolic DNA-sensing pathway | ||||
| RNA polymerase | ||||
17
|
CNOT6 | ENSG00000113300 | CCR4-NOT transcription complex subunit 6 | ||
| D6R9H6 Q9ULM6 | ||||
17
|
CNOT6L | ENSG00000138767 | CCR4-NOT transcription complex subunit 6 like | ||
| D6RGK9 D6RIW9 H0Y9C1 H0Y9Z5 Q96LI5 | ||||
| 246175 | ||||
| RNA degradation | ||||
11
|
CNOT4 | ENSG00000080802 | CCR4-NOT transcription complex subunit 4 | ||
| A0A0A0MRD2 O95628 | ||||
| 4850 | ||||
| RNA degradation | ||||
25
|
CNOT1 | ENSG00000125107 | CCR4-NOT transcription complex subunit 1 | ||
| A5YKK6 H3BMH0 H3BMZ2 H3BNB1 H3BPF1 H3BR89 H3BT18 H3BTH2 H3BU44 H3BVC9 | ||||
| 23019 | ||||
| RNA degradation | ||||
25
|
KPNB1 | ENSG00000108424 | karyopherin subunit beta 1 | ||
| J3KS06 J3KTM9 J3QKQ5 J3QR48 J3QRG4 Q14974 | ||||
| 3837 | ||||
| RNA transport | ||||
20
|
TAF5 | ENSG00000148835 | TATA-box binding protein associated factor 5 | ||
| Q15542 | ||||
| 6877 | ||||
| Basal transcription factors | ||||
9
|
TAF6 | ENSG00000106290 | TATA-box binding protein associated factor 6 | ||
| A0A1D5RMS5 C9J088 C9J7C4 C9JFL8 C9JHQ8 C9JI39 C9JIS2 C9JTY6 E5RHA1 E5RKA5 F8WEJ7 J3KR72 P49848 | ||||
| 6878 | ||||
| Basal transcription factors | ||||
14
|
PAN2 | ENSG00000135473 | poly(A) specific ribonuclease subunit PAN2 | ||
| F8VXK8 Q504Q3 | ||||
| 9924 | ||||
| RNA degradation | ||||
9
|
TNRC6B | ENSG00000100354 | trinucleotide repeat containing adaptor 6B | ||
| B0QYM5 H0Y720 Q9UPQ9 | ||||
| 23112 | ||||
11
|
CNOT10 | ENSG00000182973 | CCR4-NOT transcription complex subunit 10 | ||
| E9PCN5 H7BZZ7 H7C0K1 H7C1X9 Q9H9A5 | ||||
| 25904 | ||||
| RNA degradation | ||||
12
|
SRRM1 | ENSG00000133226 | serine and arginine repetitive matrix 1 | ||
| A9Z1X7 E9PCT1 M0QXG5 M0R088 M0R1E7 Q8IYB3 | ||||
| 10250 | ||||
| RNA transport mRNA surveillance pathway | ||||
15
|
PRMT1 | ENSG00000126457 | protein arginine methyltransferase 1 | ||
| E9PIE2 E9PIX6 E9PKG1 E9PMW9 E9PMZ2 E9PNR9 E9PQ98 H0YDE4 Q99873 | ||||
| 3276 | ||||
| FoxO signaling pathway Glucagon signaling pathway | ||||
1
|
SOX3 | ENSG00000134595 | SRY-box transcription factor 3 | ||
| P41225 | ||||
| 6658 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 297.20 KB | |
H.sapiens_subnetwork.tsv | 47.99 KB |