- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000080608
- pumilio RNA binding fam…
- DKC1
- dyskerin pseudouridine …
- 1.000
- Metabolic
- EIF6
- eukaryotic translation …
- 1.000
- Complex
- GTPBP4
- GTP binding protein 4
- 1.000
- PPI
- NVL
- nuclear VCP like
- 1.000
- Complex
- PPAN
- peter pan homolog
- 1.000
- Complex
- BOP1
- BOP1 ribosomal biogenes…
- 1.000
- Complex
- RPS3A
- ribosomal protein S3A
- 1.000
- Complex
- NAT10
- N-acetyltransferase 10
- 1.000
- Metabolic
- RPL7A
- ribosomal protein L7a
- 1.000
- Complex
- SNU13
- small nuclear ribonucle…
- 1.000
- Complex
- RPL4
- ribosomal protein L4
- 1.000
- PPI
- RPF2
- ribosome production fac…
- 1.000
- Metabolic
- RBM28
- RNA binding motif prote…
- 1.000
- PPI
- UTP15
- UTP15 small subunit pro…
- 1.000
- Complex
- NIFK
- nucleolar protein inter…
- 1.000
- Complex
- NOP2
- NOP2 nucleolar protein
- 1.000
- PPI
- RPL18
- ribosomal protein L18
- 1.000
- PPI
- RPS8
- ribosomal protein S8
- 1.000
- PPI
- NOP58
- NOP58 ribonucleoprotein
- 1.000
- Metabolic
- BRIX1
- biogenesis of ribosomes…
- 1.000
- Complex
- RSL24D1
- ribosomal L24 domain co…
- 1.000
- Metabolic
- RPL13
- ribosomal protein L13
- 1.000
- PPI
- RPL13A
- ribosomal protein L13a
- 1.000
- PPI
- PWP2
- PWP2 small subunit proc…
- 1.000
- Metabolic
- GNL2
- G protein nucleolar 2
- 1.000
- Metabolic
- DDX18
- DEAD-box helicase 18
- 1.000
- Metabolic
- RPL3
- ribosomal protein L3
- 1.000
- PPI
- NMD3
- NMD3 ribosome export ad…
- 1.000
- Metabolic
- NIP7
- nucleolar pre-rRNA proc…
- 1.000
- Metabolic
- DDX31
- DEAD-box helicase 31
- 1.000
- PPI
ENSG00000080608
pumilio RNA binding family member 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EIF6
eukaryotic translation initiation factor 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPAN
peter pan homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NVL
nuclear VCP like
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNU13
small nuclear ribonucleoprotein 13
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL3
ribosomal protein L3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DKC1
dyskerin pseudouridine synthase 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BOP1
BOP1 ribosomal biogenesis factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NMD3
NMD3 ribosome export adaptor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UTP15
UTP15 small subunit processome component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX31
DEAD-box helicase 31
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PWP2
PWP2 small subunit processome component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL13
ribosomal protein L13
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM28
RNA binding motif protein 28
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS3A
ribosomal protein S3A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOP2
NOP2 nucleolar protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NAT10
N-acetyltransferase 10
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GNL2
G protein nucleolar 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL13A
ribosomal protein L13a
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BRIX1
biogenesis of ribosomes BRX1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NIFK
nucleolar protein interacting with the FHA domain of MKI67
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL7A
ribosomal protein L7a
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPF2
ribosome production factor 2 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOP58
NOP58 ribonucleoprotein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX18
DEAD-box helicase 18
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RSL24D1
ribosomal L24 domain containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GTPBP4
GTP binding protein 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NIP7
nucleolar pre-rRNA processing protein NIP7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL4
ribosomal protein L4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS8
ribosomal protein S8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL18
ribosomal protein L18
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000080608 | ENSG00000080608 | pumilio RNA binding family member 3 | ||
| Q15397 S4R3K8 | ||||
| 9933 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
EIF6 | ENSG00000242372 | eukaryotic translation initiation factor 6 | ||
| A0A0B4J1Y7 B7ZBH1 F8WD20 F8WDS6 P56537 | ||||
| 3692 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
PPAN | ENSG00000130810 | peter pan homolog | ||
| A8MV53 C9J3W3 C9JHF7 H7C446 Q9NQ55 | ||||
| 56342 692312 | ||||
30
|
NVL | ENSG00000143748 | nuclear VCP like | ||
| A0A087WV72 C9J6P7 C9JP83 E7EWK7 E9PGD8 E9PH71 F8WF01 O15381 | ||||
| 4931 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
SNU13 | ENSG00000100138 | small nuclear ribonucleoprotein 13 | ||
| A0A3B3IRU2 A0A3B3ISH1 A0A3B3ISH9 A0A3B3ISK4 A0A3B3IUA2 B1AHD1 P55769 | ||||
| 4809 | ||||
| Ribosome biogenesis in eukaryotes Spliceosome | ||||
30
|
RPL3 | ENSG00000100316 | ribosomal protein L3 | ||
| B5MCW2 F8WCR1 G5E9G0 H7C3M2 H7C422 P39023 | ||||
| 6122 | ||||
| Ribosome | ||||
30
|
DKC1 | ENSG00000130826 | dyskerin pseudouridine synthase 1 | ||
| C9IYT0 H7BZF2 H7C0M1 H7C2Q2 H7C2Q9 O60832 | ||||
| 1736 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
BOP1 | ENSG00000261236 | BOP1 ribosomal biogenesis factor | ||
| A0A075B729 Q14137 | ||||
| 23246 | ||||
30
|
NMD3 | ENSG00000169251 | NMD3 ribosome export adaptor | ||
| C9IY70 C9IZW9 C9J0B9 C9JA08 C9K0C2 Q96D46 | ||||
| 51068 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
30
|
UTP15 | ENSG00000164338 | UTP15 small subunit processome component | ||
| A0A1Y8EI88 D6RF65 H0Y8P4 Q8TED0 | ||||
| 84135 | ||||
| Ribosome biogenesis in eukaryotes | ||||
27
|
DDX31 | ENSG00000125485 | DEAD-box helicase 31 | ||
| F8WAJ0 Q9H8H2 | ||||
| 64794 | ||||
30
|
PWP2 | ENSG00000241945 | PWP2 small subunit processome component | ||
| C9J544 Q15269 | ||||
| 5822 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
RPL13 | ENSG00000167526 | ribosomal protein L13 | ||
| H3BTH3 H3BUK8 J3KS98 J3QSB4 P26373 | ||||
| 6137 | ||||
| Ribosome | ||||
30
|
RBM28 | ENSG00000106344 | RNA binding motif protein 28 | ||
| C9JAA9 C9JE21 H7C5G8 Q9NW13 | ||||
| 55131 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
RPS3A | ENSG00000145425 | ribosomal protein S3A | ||
| D6R9B6 D6RAS7 D6RAT0 D6RB09 D6RED7 D6RG13 D6RGE0 D6RI02 E9PFI5 H0Y8L7 H0Y9Y4 P61247 | ||||
| 6189 | ||||
| Ribosome | ||||
30
|
NOP2 | ENSG00000111641 | NOP2 nucleolar protein | ||
| F5GWB7 F5GYR3 F5H359 F5H5X6 F5H709 F5H8G6 P46087 | ||||
| 4839 | ||||
30
|
NAT10 | ENSG00000135372 | N-acetyltransferase 10 | ||
| A0A087WV29 E9PJN6 E9PMU0 Q9H0A0 | ||||
| 55226 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
GNL2 | ENSG00000134697 | G protein nucleolar 2 | ||
| H0YG10 Q13823 | ||||
| 29889 | ||||
| Ribosome biogenesis in eukaryotes | ||||
29
|
RPL13A | ENSG00000142541 | ribosomal protein L13a | ||
| A0A096LPE0 M0QYS1 M0QZU1 P40429 Q8J015 | ||||
| 23521 | ||||
| Ribosome | ||||
30
|
BRIX1 | ENSG00000113460 | biogenesis of ribosomes BRX1 | ||
| Q8TDN6 | ||||
| 55299 | ||||
30
|
NIFK | ENSG00000155438 | nucleolar protein interacting with the FHA domain of MKI67 | ||
| C9J6C5 C9J808 H7BZL0 Q9BYG3 | ||||
| 84365 | ||||
30
|
RPL7A | ENSG00000148303 | ribosomal protein L7a | ||
| P62424 Q5T8U2 Q5T8U3 | ||||
| 6130 | ||||
| Ribosome | ||||
30
|
RPF2 | ENSG00000197498 | ribosome production factor 2 homolog | ||
| Q5VXM9 Q5VXN0 Q9H7B2 U3KQN5 | ||||
| 84154 | ||||
30
|
NOP58 | ENSG00000055044 | NOP58 ribonucleoprotein | ||
| F8WED0 H7BZ72 Q9Y2X3 | ||||
| 51602 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
DDX18 | ENSG00000088205 | DEAD-box helicase 18 | ||
| H7C452 Q9NVP1 | ||||
| 8886 | ||||
30
|
RSL24D1 | ENSG00000137876 | ribosomal L24 domain containing 1 | ||
| H3BMQ2 H3BPF2 Q9UHA3 | ||||
| 51187 | ||||
| Ribosome | ||||
30
|
GTPBP4 | ENSG00000107937 | GTP binding protein 4 | ||
| Q5T3R7 Q9BZE4 | ||||
| 23560 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
NIP7 | ENSG00000132603 | nucleolar pre-rRNA processing protein NIP7 | ||
| J3QLW7 J3QRD6 J3QRR4 Q9Y221 | ||||
| 51388 | ||||
30
|
RPL4 | ENSG00000174444 | ribosomal protein L4 | ||
| H3BM89 H3BTP7 H3BU31 P36578 | ||||
| 6124 | ||||
| Ribosome | ||||
29
|
RPS8 | ENSG00000142937 | ribosomal protein S8 | ||
| P62241 Q5JR95 | ||||
| 6202 | ||||
| Ribosome | ||||
29
|
RPL18 | ENSG00000063177 | ribosomal protein L18 | ||
| A0A075B7A0 F8VUA6 F8VXR6 F8VYV2 G3V203 H0YHA7 J3QQ67 Q07020 | ||||
| 6141 | ||||
| Ribosome |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 349.75 KB | |
H.sapiens_subnetwork.tsv | 92.72 KB |