- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000077458
- family with sequence si…
- SRPK1
- SRSF protein kinase 1
- 0.999
- PPI
- SRPK2
- SRSF protein kinase 2
- 0.993
- Complex
- ADO
- 2-aminoethanethiol diox…
- 0.983
- PPI
- SMU1
- SMU1 DNA replication re…
- 0.975
- Metabolic
- DHX15
- DEAH-box helicase 15
- 0.953
- Metabolic
- PRPF4B
- pre-mRNA processing fac…
- 0.952
- Metabolic
- CCNL2
- cyclin L2
- 0.951
- Metabolic
- PRMT5
- protein arginine methyl…
- 0.946
- PPI
- U2AF1
- U2 small nuclear RNA au…
- 0.945
- Metabolic
- PRPF40A
- pre-mRNA processing fac…
- 0.941
- Metabolic
- MYNN
- myoneurin
- 0.939
- Metabolic
- VPS72
- vacuolar protein sortin…
- 0.935
- Metabolic
- CCNL1
- cyclin L1
- 0.921
- Metabolic
- PPWD1
- peptidylprolyl isomeras…
- 0.896
- Metabolic
- SNRPC
- small nuclear ribonucle…
- 0.895
- Metabolic
- CTR9
- CTR9 homolog, Paf1/RNA …
- 0.883
- Metabolic
- RBM25
- RNA binding motif prote…
- 0.879
- Metabolic
- SF3B1
- splicing factor 3b subu…
- 0.878
- Metabolic
- ALYREF
- Aly/REF export factor
- 0.875
- Metabolic
- RBM39
- RNA binding motif prote…
- 0.875
- Metabolic
- PNN
- pinin, desmosome associ…
- 0.873
- Metabolic
- TCEA1
- transcription elongatio…
- 0.868
- Metabolic
- THOC3
- THO complex 3
- 0.865
- Metabolic
- MRE11
- MRE11 homolog, double s…
- 0.862
- Metabolic
- NOC3L
- NOC3 like DNA replicati…
- 0.860
- Metabolic
- TCERG1
- transcription elongatio…
- 0.855
- Metabolic
- PRPF40B
- pre-mRNA processing fac…
- 0.854
- Metabolic
- RBBP6
- RB binding protein 6, u…
- 0.853
- Metabolic
- NIPBL
- NIPBL cohesin loading f…
- 0.843
- Complex
- CWC22
- CWC22 spliceosome assoc…
- 0.842
- Metabolic
ENSG00000077458
family with sequence similarity 76 member B
- Use as query
- Use pair as query
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- Ensembl
- UniProt
- NCBI
PRPF4B
pre-mRNA processing factor 4B
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- Use pair as query
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- Ensembl
- UniProt
- NCBI
VPS72
vacuolar protein sorting 72 homolog
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- Ensembl
- UniProt
- NCBI
ALYREF
Aly/REF export factor
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- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPC
small nuclear ribonucleoprotein polypeptide C
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- Ensembl
- UniProt
- NCBI
DHX15
DEAH-box helicase 15
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- Add to current query
- Ensembl
- UniProt
- NCBI
RBM25
RNA binding motif protein 25
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- Add to current query
- Ensembl
- UniProt
- NCBI
PNN
pinin, desmosome associated protein
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- Add to current query
- Ensembl
- UniProt
- NCBI
CCNL1
cyclin L1
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- Add to current query
- Ensembl
- UniProt
- NCBI
PRMT5
protein arginine methyltransferase 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- C9JSX3
- G3V2F5
- G3V2L6
- G3V2X6
- G3V3A3
- G3V507
- G3V580
- G3V5L5
- G3V5T6
- H0YJ77
- H0YJD3
- H0YJX6
- H0YJY6
- H7BZ44
- O14744
- NCBI
TCERG1
transcription elongation regulator 1
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- Ensembl
- UniProt
- NCBI
PRPF40A
pre-mRNA processing factor 40 homolog A
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- Ensembl
- UniProt
- NCBI
SF3B1
splicing factor 3b subunit 1
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- Ensembl
- UniProt
- NCBI
TCEA1
transcription elongation factor A1
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- Ensembl
- UniProt
- NCBI
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component
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- Ensembl
- UniProt
- NCBI
NIPBL
NIPBL cohesin loading factor
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- Add to current query
- Ensembl
- UniProt
- NCBI
SMU1
SMU1 DNA replication regulator and spliceosomal factor
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- Ensembl
- UniProt
- NCBI
MYNN
myoneurin
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- Add to current query
- Ensembl
- UniProt
- NCBI
PPWD1
peptidylprolyl isomerase domain and WD repeat containing 1
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- Add to current query
- Ensembl
- UniProt
- NCBI
CWC22
CWC22 spliceosome associated protein homolog
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM39
RNA binding motif protein 39
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- Add to current query
- Ensembl
- UniProt
- A0A087X122
- A0A0U1RQH7
- A0A0U1RQW2
- A8MYG5
- F2Z2Z5
- F2Z3E6
- F8WF24
- F8WF73
- G3XAC6
- H0Y4X3
- H0Y6I9
- H7BZG3
- Q14498
- Q5QP22
- Q5QP23
- NCBI
U2AF1
U2 small nuclear RNA auxiliary factor 1
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- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF40B
pre-mRNA processing factor 40 homolog B
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- Add to current query
- Ensembl
- UniProt
- NCBI
THOC3
THO complex 3
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- Add to current query
- Ensembl
- UniProt
- NCBI
RBBP6
RB binding protein 6, ubiquitin ligase
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- Ensembl
- UniProt
- NCBI
SRPK1
SRSF protein kinase 1
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- Add to current query
- Ensembl
- UniProt
- NCBI
CCNL2
cyclin L2
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
MRE11
MRE11 homolog, double strand break repair nuclease
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOC3L
NOC3 like DNA replication regulator
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRPK2
SRSF protein kinase 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ADO
2-aminoethanethiol dioxygenase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
29
|
PRPF4B | ENSG00000112739 | pre-mRNA processing factor 4B | ||
| H0YDJ3 Q13523 | ||||
| 8899 | ||||
25
|
VPS72 | ENSG00000163159 | vacuolar protein sorting 72 homolog | ||
| A0A1W2PPT2 Q15906 | ||||
| 6944 | ||||
25
|
ALYREF | ENSG00000183684 | Aly/REF export factor | ||
| E9PB61 Q86V81 | ||||
| 10189 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
21
|
SNRPC | ENSG00000124562 | small nuclear ribonucleoprotein polypeptide C | ||
| A0A0A0MRR7 P09234 Q5TAL2 | ||||
| 6631 | ||||
| Spliceosome | ||||
28
|
DHX15 | ENSG00000109606 | DEAH-box helicase 15 | ||
| O43143 | ||||
| 1665 | ||||
| Spliceosome | ||||
29
|
RBM25 | ENSG00000119707 | RNA binding motif protein 25 | ||
| E9PQU5 E9PSE8 H0YE46 P49756 | ||||
| 58517 | ||||
| Spliceosome | ||||
28
|
PNN | ENSG00000100941 | pinin, desmosome associated protein | ||
| G3V579 G3V5F0 Q9H307 | ||||
| 5411 | ||||
| RNA transport mRNA surveillance pathway | ||||
25
|
CCNL1 | ENSG00000163660 | cyclin L1 | ||
| H7C4G1 Q9UK58 | ||||
| 57018 | ||||
22
|
PRMT5 | ENSG00000100462 | protein arginine methyltransferase 5 | ||
| C9JSX3 G3V2F5 G3V2L6 G3V2X6 G3V3A3 G3V507 G3V580 G3V5L5 G3V5T6 H0YJ77 H0YJD3 H0YJX6 H0YJY6 H7BZ44 O14744 | ||||
| 10419 | ||||
| RNA transport | ||||
23
|
TCERG1 | ENSG00000113649 | transcription elongation regulator 1 | ||
| G3V220 O14776 | ||||
| 10915 | ||||
| Spliceosome | ||||
28
|
PRPF40A | ENSG00000196504 | pre-mRNA processing factor 40 homolog A | ||
| A0A3F2YNY6 F5H578 H0YG38 H7BXZ7 H7C2N3 O75400 | ||||
| 55660 | ||||
| Spliceosome | ||||
28
|
SF3B1 | ENSG00000115524 | splicing factor 3b subunit 1 | ||
| A0A494C1M2 B4DGZ4 F8WC19 H7C341 O75533 | ||||
| 23451 | ||||
| Spliceosome | ||||
29
|
TCEA1 | ENSG00000187735 | transcription elongation factor A1 | ||
| A0A1W2PPV7 A0A1W2PPZ5 A0A1W2PRL9 A0A1W2PS15 B7Z4S1 E5RFI1 E5RIS7 E5RJ93 E5RK46 P23193 | ||||
| 6917 | ||||
26
|
CTR9 | ENSG00000198730 | CTR9 homolog, Paf1/RNA polymerase II complex component | ||
| A0A2R8Y3S3 H0YCE8 Q6PD62 | ||||
| 9646 | ||||
26
|
NIPBL | ENSG00000164190 | NIPBL cohesin loading factor | ||
| A0A590UJS4 H0Y8M3 Q6KC79 | ||||
| 25836 | ||||
27
|
SMU1 | ENSG00000122692 | SMU1 DNA replication regulator and spliceosomal factor | ||
| Q2TAY7 | ||||
| 55234 | ||||
13
|
MYNN | ENSG00000085274 | myoneurin | ||
| Q9NPC7 R4GMT1 | ||||
| 55892 | ||||
27
|
PPWD1 | ENSG00000113593 | peptidylprolyl isomerase domain and WD repeat containing 1 | ||
| D6R9Q1 D6RA12 D6RB19 D6RD43 D6RDA4 D6RHV0 F5H7P7 H0Y8N5 Q96BP3 | ||||
| 23398 | ||||
29
|
CWC22 | ENSG00000163510 | CWC22 spliceosome associated protein homolog | ||
| B7WP74 Q9HCG8 | ||||
| 57703 | ||||
29
|
RBM39 | ENSG00000131051 | RNA binding motif protein 39 | ||
| A0A087X122 A0A0U1RQH7 A0A0U1RQW2 A8MYG5 F2Z2Z5 F2Z3E6 F8WF24 F8WF73 G3XAC6 H0Y4X3 H0Y6I9 H7BZG3 Q14498 Q5QP22 Q5QP23 | ||||
| 9584 | ||||
27
|
U2AF1 | ENSG00000160201 | U2 small nuclear RNA auxiliary factor 1 | ||
| A0A1B0GW87 Q01081 | ||||
| 102724594 7307 | ||||
| Spliceosome | ||||
23
|
PRPF40B | ENSG00000110844 | pre-mRNA processing factor 40 homolog B | ||
| F8VU11 H0YII7 Q6NWY9 | ||||
| 25766 | ||||
| Spliceosome | ||||
23
|
THOC3 | ENSG00000051596 | THO complex 3 | ||
| D6REC9 D6RGZ2 H0Y9T1 H0YA11 H0YAG7 H0YAJ0 H7C0C5 Q96J01 | ||||
| 84321 | ||||
| Spliceosome RNA transport | ||||
25
|
RBBP6 | ENSG00000122257 | RB binding protein 6, ubiquitin ligase | ||
| A0A087WY32 A0A2R8Y880 H3BSK8 H3BUN0 I3L3Y2 Q7Z6E9 | ||||
| 5930 | ||||
28
|
SRPK1 | ENSG00000096063 | SRSF protein kinase 1 | ||
| D6RB98 D6RBF8 D6RBM8 D6RDZ3 H0Y932 H3BLV9 Q96SB4 | ||||
| 6732 | ||||
26
|
CCNL2 | ENSG00000221978 | cyclin L2 | ||
| A0A0A0MSF3 C9J148 J3KRL1 J3QSH2 Q96S94 | ||||
| 81669 | ||||
25
|
MRE11 | ENSG00000020922 | MRE11 homolog, double strand break repair nuclease | ||
| F5GXT0 F5H256 F5H742 F8W7U8 P49959 | ||||
| 4361 | ||||
| Non-homologous end-joining Homologous recombination | ||||
24
|
NOC3L | ENSG00000173145 | NOC3 like DNA replication regulator | ||
| Q8WTT2 | ||||
| 64318 | ||||
25
|
SRPK2 | ENSG00000135250 | SRSF protein kinase 2 | ||
| C9J2M4 C9JWF7 F8WAV6 F8WBW4 H7C521 H7C5L6 P78362 | ||||
| 6733 | ||||
1
|
ADO | ENSG00000181915 | 2-aminoethanethiol dioxygenase | ||
| Q96SZ5 | ||||
| 84890 | ||||
| Taurine and hypotaurine metabolism |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 311.02 KB | |
H.sapiens_subnetwork.tsv | 71.66 KB |