Found 1 of 1 query genes

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Query interactions

Interaction partners
Confidence
Network
MEX
PIN
SCL
PHP
MIR
TFB
PEX
GIN
DOM
QMS
GRG
Evidence types
HSA
MMU
RNO
CFA
GGA
DRE
CIN
DME
CEL
BTA
SCE
ATH
SPO
BSU
ECO
PFA
DDI
SSO
SSC
MJA
OSA
Species
In Gold st.

ID Query gene
ID Query ortholog

Log-likelihood ratio (LLR)
	Highly positive
	Positive
	Zero
	Negative
	Highly negative
Known coupling
	This network
	Other network

2. ENSG00000071655
3. methyl-CpG binding doma…
- 2. HDAC1
  3. histone deacetylase 1
  4. 1.000
  5. PPI
- 2. MTA2
  3. metastasis associated 1…
  4. 1.000
  5. PPI
- 2. RBBP4
  3. RB binding protein 4, c…
  4. 1.000
  5. PPI
- 2. MTA1
  3. metastasis associated 1
  4. 1.000
  5. PPI
- 2. GATAD2A
  3. GATA zinc finger domain…
  4. 1.000
  5. PPI
- 2. MTA3
  3. metastasis associated 1…
  4. 1.000
  5. PPI
- 2. CHD4
  3. chromodomain helicase D…
  4. 1.000
  5. PPI
- 2. HDAC2
  3. histone deacetylase 2
  4. 1.000
  5. PPI
- 2. RBBP7
  3. RB binding protein 7, c…
  4. 1.000
  5. PPI
- 2. GATAD2B
  3. GATA zinc finger domain…
  4. 1.000
  5. PPI
- 2. MBD2
  3. methyl-CpG binding doma…
  4. 1.000
  5. PPI
- 2. CHD3
  3. chromodomain helicase D…
  4. 1.000
  5. PPI
- 2. KDM1A
  3. lysine demethylase 1A
  4. 1.000
  5. PPI
- 2. L3MBTL2
  3. L3MBTL histone methyl-l…
  4. 1.000
  5. PPI
- 2. MYC
  3. MYC proto-oncogene, bHL…
  4. 1.000
  5. PPI
- 2. ZBTB7A
  3. zinc finger and BTB dom…
  4. 0.999
  5. PPI
- 2. SMARCB1
  3. SWI/SNF related, matrix…
  4. 0.999
  5. PPI
- 2. NR2C1
  3. nuclear receptor subfam…
  4. 0.999
  5. PPI
- 2. SMARCD1
  3. SWI/SNF related, matrix…
  4. 0.998
  5. PPI
- 2. SMARCC1
  3. SWI/SNF related, matrix…
  4. 0.997
  5. PPI
- 2. SMARCA5
  3. SWI/SNF related, matrix…
  4. 0.997
  5. PPI
- 2. SMARCA4
  3. SWI/SNF related, matrix…
  4. 0.996
  5. PPI
- 2. CDK2AP1
  3. cyclin dependent kinase…
  4. 0.996
  5. PPI
- 2. EHMT2
  3. euchromatic histone lys…
  4. 0.996
  5. Complex
- 2. DDX5
  3. DEAD-box helicase 5
  4. 0.996
  5. PPI
- 2. RUVBL1
  3. RuvB like AAA ATPase 1
  4. 0.996
  5. PPI
- 2. ARID1A
  3. AT-rich interaction dom…
  4. 0.995
  5. PPI
- 2. ATF7
  3. activating transcriptio…
  4. 0.995
  5. PPI
- 2. DNMT1
  3. DNA methyltransferase 1
  4. 0.995
  5. PPI
- 2. SIN3A
  3. SIN3 transcription regu…
  4. 0.995
  5. PPI

Subnetwork gene interactions

ENSG00000071655

methyl-CpG binding domain protein 3

FunCoup

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Ensembl

ENSG00000071655

UniProt

NCBI

53615

GATAD2B

GATA zinc finger domain containing 2B

FunCoup

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Ensembl

ENSG00000143614

UniProt

NCBI

57459

MTA3

metastasis associated 1 family member 3

FunCoup

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Ensembl

ENSG00000057935

UniProt

NCBI

57504

GATAD2A

GATA zinc finger domain containing 2A

FunCoup

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Ensembl

ENSG00000167491

UniProt

NCBI

54815

HDAC2

histone deacetylase 2

FunCoup

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Ensembl

ENSG00000196591

UniProt

NCBI

3066

MTA1

metastasis associated 1

FunCoup

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Ensembl

ENSG00000182979

UniProt

NCBI

9112

MBD2

methyl-CpG binding domain protein 2

FunCoup

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Ensembl

ENSG00000134046

UniProt

NCBI

8932

CHD4

chromodomain helicase DNA binding protein 4

FunCoup

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Ensembl

ENSG00000111642

UniProt

NCBI

1108

RBBP7

RB binding protein 7, chromatin remodeling factor

FunCoup

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Ensembl

ENSG00000102054

UniProt

NCBI

5931

SIN3A

SIN3 transcription regulator family member A

FunCoup

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Ensembl

ENSG00000169375

UniProt

NCBI

25942

SMARCA4

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

FunCoup

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Ensembl

ENSG00000127616

UniProt

NCBI

6597

SMARCA5

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5

FunCoup

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Ensembl

ENSG00000153147

UniProt

O60264

NCBI

8467

MYC

MYC proto-oncogene, bHLH transcription factor

FunCoup

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Ensembl

ENSG00000136997

UniProt

NCBI

4609

MTA2

metastasis associated 1 family member 2

FunCoup

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Ensembl

ENSG00000149480

UniProt

O94776

NCBI

9219

ARID1A

AT-rich interaction domain 1A

FunCoup

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Ensembl

ENSG00000117713

UniProt

NCBI

8289

L3MBTL2

L3MBTL histone methyl-lysine binding protein 2

FunCoup

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Ensembl

ENSG00000100395

UniProt

NCBI

83746

DDX5

DEAD-box helicase 5

FunCoup

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Ensembl

ENSG00000108654

UniProt

NCBI

1655

RUVBL1

RuvB like AAA ATPase 1

FunCoup

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Ensembl

ENSG00000175792

UniProt

NCBI

8607

SMARCD1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1

FunCoup

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Ensembl

ENSG00000066117

UniProt

NCBI

6602

CHD3

chromodomain helicase DNA binding protein 3

FunCoup

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Ensembl

ENSG00000170004

UniProt

NCBI

1107

RBBP4

RB binding protein 4, chromatin remodeling factor

FunCoup

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Ensembl

ENSG00000162521

UniProt

NCBI

5928

CDK2AP1

cyclin dependent kinase 2 associated protein 1

FunCoup

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Ensembl

ENSG00000111328

UniProt

NCBI

8099

HDAC1

histone deacetylase 1

FunCoup

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Ensembl

ENSG00000116478

UniProt

NCBI

3065

KDM1A

lysine demethylase 1A

FunCoup

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Ensembl

ENSG00000004487

UniProt

NCBI

23028

EHMT2

euchromatic histone lysine methyltransferase 2

FunCoup

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Ensembl

ENSG00000204371

UniProt

NCBI

10919

SMARCB1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

FunCoup

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Ensembl

ENSG00000099956

UniProt

NCBI

6598

ZBTB7A

zinc finger and BTB domain containing 7A

FunCoup

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Ensembl

ENSG00000178951

UniProt

O95365

NCBI

51341

SMARCC1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1

FunCoup

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Ensembl

ENSG00000173473

UniProt

NCBI

6599

ATF7

activating transcription factor 7

FunCoup

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Ensembl

ENSG00000170653

UniProt

NCBI

11016

NR2C1

nuclear receptor subfamily 2 group C member 1

FunCoup

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Ensembl

ENSG00000120798

UniProt

NCBI

7181

DNMT1

DNA methyltransferase 1

FunCoup

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Ensembl

ENSG00000130816

UniProt

NCBI

1786

Query genes

		Identifier	Description
30	ENSG00000071655	ENSG00000071655	methyl-CpG binding domain protein 3
		UniProt	A0A087WT34 A0A087WVG6 A0A087WZ12 A0A087X1H1 A0A0A0MTS6 K7EIE8 O95983
		NCBI	53615

Subnetwork genes

		Identifier	Description
25	GATAD2B	ENSG00000143614	GATA zinc finger domain containing 2B
		UniProt	A0A0U1RR30 A0A0U1RR34 A0A0U1RRK3 A0A0U1RRM1 A0A1B0GVS4 A0A1B0GW07 Q8WXI9
		NCBI	57459
24	MTA3	ENSG00000057935	metastasis associated 1 family member 3
		UniProt	C9JR73 E7EQY4 E7EV10 E9PCS8 E9PF88 F6RRE2 Q9BTC8
		NCBI	57504
24	GATAD2A	ENSG00000167491	GATA zinc finger domain containing 2A
		UniProt	C9JGN4 C9JHD7 C9JJK9 C9JMI3 C9JVY3 H7C3H1 Q86YP4 V9GY85 V9GYX5
		NCBI	54815
29	HDAC2	ENSG00000196591	histone deacetylase 2
		UniProt	E5RFI6 E5RFP9 E5RG37 E5RGV4 E5RH52 E5RHE7 E5RJ04 E5RK19 H3BM24 Q92769
		NCBI	3066
		KEGG signaling	Thyroid hormone signaling pathway Cell cycle Notch signaling pathway
26	MTA1	ENSG00000182979	metastasis associated 1
		UniProt	E7ESY4 F8W9Y9 H0Y4T7 H0YIT0 H7C3F3 Q13330
		NCBI	9112
24	MBD2	ENSG00000134046	methyl-CpG binding domain protein 2
		UniProt	J3KSA7 Q9UBB5 X6RBL6
		NCBI	8932
26	CHD4	ENSG00000111642	chromodomain helicase DNA binding protein 4
		UniProt	A0A0C4DGG9 A0A2R8Y212 A0A2R8Y425 A0A2R8Y4X2 A0A2R8Y512 A0A2R8Y521 A0A2R8Y539 A0A2R8Y5J0 A0A2R8Y5M9 A0A2R8Y5Z7 A0A2R8Y685 A0A2R8Y6G9 A0A2R8Y795 A0A2R8Y7I0 A0A2R8Y7M9 A0A2R8Y7X1 A0A2R8Y8B3 A0A2R8Y8C1 A0A2R8YD40 A0A2R8YDJ9 A0A2R8YDW2 A0A2R8YE38 A0A2R8YER1 A0A2R8YFD8 A0A2R8YFK9 A0A2U3TZM0 F5GWX5 F5H596 F5H6N4 Q14839
		NCBI	1108
24	RBBP7	ENSG00000102054	RB binding protein 7, chromatin remodeling factor
		UniProt	C9J7L0 C9JAJ9 E9PC52 Q16576 Q5JNZ6 Q5JP01 Q5JP02
		NCBI	5931
28	SIN3A	ENSG00000169375	SIN3 transcription regulator family member A
		UniProt	H3BMA2 H3BNA0 H3BNZ3 H3BP90 H3BQ76 H3BQ88 H3BQL7 H3BT34 Q96ST3
		NCBI	25942
		KEGG signaling	Thyroid hormone signaling pathway
27	SMARCA4	ENSG00000127616	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
		UniProt	A0A0A0MT49 A0A2R8Y440 A0A2R8Y4C5 A0A2R8Y4P4 A0A2R8Y4R6 A0A2R8Y523 A0A2R8Y526 A0A2R8Y583 A0A2R8Y5K3 A0A2R8Y6N0 A0A2R8Y6V2 A0A2R8Y7F3 A0A2R8Y7R0 A0A2R8Y7S2 A0A2R8Y7Y7 A0A2R8Y866 A0A2R8YCY3 A0A2R8YDA1 A0A2R8YF38 A0A2R8YF58 A0A2R8YF80 A0A2R8YFK5 A0A2R8YFV8 A0A2R8YG32 A0A2R8YGG3 A0A2R8YGP5 K7EP28 K7EQF0 P51532 Q9HBD4
		NCBI	6597
25	SMARCA5	ENSG00000153147	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
		UniProt	O60264
		NCBI	8467
6	MYC	ENSG00000136997	MYC proto-oncogene, bHLH transcription factor
		UniProt	A0A087WUS5 A0A0B4J1R1 A0A494C098 A0A494C1T8 H0YBG3 H0YBT0 P01106 Q14899 Q16591
		NCBI	4609
		KEGG signaling	JAK-STAT signaling pathway Wnt signaling pathway Thyroid hormone signaling pathway ErbB signaling pathway Cell cycle MAPK signaling pathway TGF-beta signaling pathway PI3K-Akt signaling pathway Hippo signaling pathway
28	MTA2	ENSG00000149480	metastasis associated 1 family member 2
		UniProt	O94776
		NCBI	9219
25	ARID1A	ENSG00000117713	AT-rich interaction domain 1A
		UniProt	A0A087WUV6 A0A1B0GTU5 A0A1B0GVT5 E9PQW6 H0Y488 H0YCU6 H0YEW5 O14497
		NCBI	8289
23	L3MBTL2	ENSG00000100395	L3MBTL histone methyl-lysine binding protein 2
		UniProt	F8WBL1 H0Y5M2 H7C228 Q969R5
		NCBI	83746
14	DDX5	ENSG00000108654	DEAD-box helicase 5
		UniProt	A0A0G2JLI4 J3KRX8 J3KRZ1 J3KTA4 J3KTQ4 J3QKN9 J3QLG9 J3QR02 J3QR62 J3QRN5 J3QRQ7 J3QS79 J3QS97 J3QSF1 K7EKV0 P17844 X6RLV5
		NCBI	1655
		KEGG metabolic	Spliceosome
24	RUVBL1	ENSG00000175792	RuvB like AAA ATPase 1
		UniProt	E7ETR0 H7C4G5 H7C4I3 J3QLR1 Q9Y265
		NCBI	8607
		KEGG signaling	Wnt signaling pathway
24	SMARCD1	ENSG00000066117	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
		UniProt	F8VRQ4 F8VUB0 F8VW95 F8VZ70 H0YHV1 Q96GM5
		NCBI	6602
25	CHD3	ENSG00000170004	chromodomain helicase DNA binding protein 3
		UniProt	A0A5F9ZHM2 A0A5F9ZHX5 H7C0J3 H7C2H0 H7C3H7 I3L1I4 I3L229 K7EPV1 Q12873
		NCBI	1107
27	RBBP4	ENSG00000162521	RB binding protein 4, chromatin remodeling factor
		UniProt	C9JPP3 E9PIC4 E9PND5 E9PNS2 E9PNS6 H0YCT5 H0YDK2 H0YEU5 H0YF10 Q09028
		NCBI	5928
14	CDK2AP1	ENSG00000111328	cyclin dependent kinase 2 associated protein 1
		UniProt	F5GZF0 O14519
		NCBI	8099
28	HDAC1	ENSG00000116478	histone deacetylase 1
		UniProt	Q13547 Q5TEE2
		NCBI	3065
		KEGG signaling	Thyroid hormone signaling pathway Cell cycle Notch signaling pathway
25	KDM1A	ENSG00000004487	lysine demethylase 1A
		UniProt	O60341 R4GMP9 R4GMQ1
		NCBI	23028
16	EHMT2	ENSG00000204371	euchromatic histone lysine methyltransferase 2
		UniProt	A2ABF8 A2ABF9 H0Y4K5 Q96KQ7
		NCBI	10919
		KEGG metabolic	Lysine degradation
22	SMARCB1	ENSG00000099956	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
		UniProt	A0A0G2JRV3 A0A0U1RQQ2 A0A0U1RRB8 A0A2R8Y5N5 A0A2R8Y5Z2 A0A2R8YDN6 A0A2R8YEE8 B5MCL5 C9JTA6 G5E975 Q12824
		NCBI	6598
12	ZBTB7A	ENSG00000178951	zinc finger and BTB domain containing 7A
		UniProt	O95365
		NCBI	51341
28	SMARCC1	ENSG00000173473	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
		UniProt	F8WE13 Q92922
		NCBI	6599
5	ATF7	ENSG00000170653	activating transcription factor 7
		UniProt	F8VWG7 K7EKZ7 K7ESA4 P17544
		NCBI	11016
7	NR2C1	ENSG00000120798	nuclear receptor subfamily 2 group C member 1
		UniProt	A0A087WUK4 F8W1Q1 H0YHC6 H0YIV1 P13056
		NCBI	7181
15	DNMT1	ENSG00000130816	DNA methyltransferase 1
		UniProt	K7EIZ6 K7EJL0 K7EKC3 K7ELB1 K7EMU8 K7ENQ6 K7ENW7 K7EP77 K7ER10 K7ERQ1 P26358
		NCBI	1786
		KEGG metabolic	Cysteine and methionine metabolism

Enrichment analysis

Search for enrichment of pathways or functional gene sets for your subnetwork genes

To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX

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	jSquid_subnetworks.xml	329.51 KB
	H.sapiens_subnetwork.tsv	57.22 KB

Species:

Network information:

Filter Results:

Network appearance:

ENSG00000071655

GATAD2B

MTA3

GATAD2A

HDAC2

MTA1

MBD2

CHD4

RBBP7

SIN3A

SMARCA4

SMARCA5

MYC

MTA2

ARID1A

L3MBTL2

DDX5

RUVBL1

SMARCD1

CHD3

RBBP4

CDK2AP1

HDAC1

KDM1A

EHMT2

SMARCB1

ZBTB7A

SMARCC1

ATF7

NR2C1

DNMT1

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