- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000004534
- RNA binding motif prote…
- U2AF2
- U2 small nuclear RNA au…
- 0.986
- PPI
- TENT4B
- terminal nucleotidyltra…
- 0.970
- PPI
- HNRNPA1
- heterogeneous nuclear r…
- 0.957
- PPI
- PAK5
- p21 (RAC1) activated ki…
- 0.956
- PPI
- EEF1G
- eukaryotic translation …
- 0.950
- PPI
- SF3B3
- splicing factor 3b subu…
- 0.947
- PPI
- PPP1CB
- protein phosphatase 1 c…
- 0.861
- PPI
- PRPF38B
- pre-mRNA processing fac…
- 0.791
- Metabolic
- BAZ1B
- bromodomain adjacent to…
- 0.744
- Metabolic
- TAF7
- TATA-box binding protei…
- 0.724
- PPI
- SRSF7
- serine and arginine ric…
- 0.721
- Metabolic
- SRRT
- serrate, RNA effector m…
- 0.699
- Metabolic
- SF3B1
- splicing factor 3b subu…
- 0.692
- Metabolic
- DHX15
- DEAH-box helicase 15
- 0.648
- Complex
- SF3B2
- splicing factor 3b subu…
- 0.645
- Complex
- RNPS1
- RNA binding protein wit…
- 0.629
- PPI
- TENT2
- terminal nucleotidyltra…
- 0.614
- Complex
- POLR2B
- RNA polymerase II subun…
- 0.605
- Metabolic
- SMC3
- structural maintenance …
- 0.574
- Metabolic
- CCNL1
- cyclin L1
- 0.568
- Metabolic
- BUD13
- BUD13 homolog
- 0.567
- Complex
- DHX8
- DEAH-box helicase 8
- 0.567
- Metabolic
- SRRM1
- serine and arginine rep…
- 0.555
- Complex
- CCNT2
- cyclin T2
- 0.552
- Metabolic
- PAXBP1
- PAX3 and PAX7 binding p…
- 0.528
- Metabolic
- MATR3
- matrin 3
- 0.511
- Complex
- PPP4R3B
- protein phosphatase 4 r…
- 0.506
- Metabolic
- SUPT16H
- SPT16 homolog, facilita…
- 0.496
- Complex
- TAF5
- TATA-box binding protei…
- 0.479
- Metabolic
- SUPT20H
- SPT20 homolog, SAGA com…
- 0.471
- Complex
ENSG00000004534
RNA binding motif protein 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B1
splicing factor 3b subunit 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRRM1
serine and arginine repetitive matrix 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DHX15
DEAH-box helicase 15
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TAF5
TATA-box binding protein associated factor 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DHX8
DEAH-box helicase 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPP4R3B
protein phosphatase 4 regulatory subunit 3B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B3
splicing factor 3b subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BUD13
BUD13 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT20H
SPT20 homolog, SAGA complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CCNL1
cyclin L1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPA1
heterogeneous nuclear ribonucleoprotein A1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B2
splicing factor 3b subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMC3
structural maintenance of chromosomes 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CCNT2
cyclin T2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPP1CB
protein phosphatase 1 catalytic subunit beta
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
U2AF2
U2 small nuclear RNA auxiliary factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RNPS1
RNA binding protein with serine rich domain 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- H3BMM9
- H3BMS0
- H3BNI3
- H3BNU7
- H3BP82
- H3BPG5
- H3BRK4
- H3BTC0
- H3BTR6
- H3BTV0
- H3BTY0
- H3BUG0
- H3BUL0
- H3BV80
- Q15287
- NCBI
BAZ1B
bromodomain adjacent to zinc finger domain 1B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRRT
serrate, RNA effector molecule
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAXBP1
PAX3 and PAX7 binding protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TENT2
terminal nucleotidyltransferase 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TENT4B
terminal nucleotidyltransferase 4B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAK5
p21 (RAC1) activated kinase 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TAF7
TATA-box binding protein associated factor 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2B
RNA polymerase II subunit B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EEF1G
eukaryotic translation elongation factor 1 gamma
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF38B
pre-mRNA processing factor 38B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRSF7
serine and arginine rich splicing factor 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
26
|
SF3B1 | ENSG00000115524 | splicing factor 3b subunit 1 | ||
| A0A494C1M2 B4DGZ4 F8WC19 H7C341 O75533 | ||||
| 23451 | ||||
| Spliceosome | ||||
23
|
SRRM1 | ENSG00000133226 | serine and arginine repetitive matrix 1 | ||
| A9Z1X7 E9PCT1 M0QXG5 M0R088 M0R1E7 Q8IYB3 | ||||
| 10250 | ||||
| RNA transport mRNA surveillance pathway | ||||
21
|
SUPT16H | ENSG00000092201 | SPT16 homolog, facilitates chromatin remodeling subunit | ||
| G3V2X0 G3V401 G3V5A4 Q9Y5B9 | ||||
| 11198 | ||||
27
|
DHX15 | ENSG00000109606 | DEAH-box helicase 15 | ||
| O43143 | ||||
| 1665 | ||||
| Spliceosome | ||||
26
|
TAF5 | ENSG00000148835 | TATA-box binding protein associated factor 5 | ||
| Q15542 | ||||
| 6877 | ||||
| Basal transcription factors | ||||
22
|
DHX8 | ENSG00000067596 | DEAH-box helicase 8 | ||
| F5H658 K7EJH9 K7END7 K7EQH7 Q14562 | ||||
| 1659 | ||||
| Spliceosome | ||||
17
|
PPP4R3B | ENSG00000275052 | protein phosphatase 4 regulatory subunit 3B | ||
| Q5MIZ7 | ||||
| 57223 | ||||
| Glucagon signaling pathway | ||||
25
|
SF3B3 | ENSG00000189091 | splicing factor 3b subunit 3 | ||
| H3BMB0 I3L4G7 J3QKV4 J3QL37 J3QRB2 Q15393 | ||||
| 23450 | ||||
| Spliceosome | ||||
20
|
BUD13 | ENSG00000137656 | BUD13 homolog | ||
| H7C462 Q9BRD0 | ||||
| 84811 | ||||
17
|
SUPT20H | ENSG00000102710 | SPT20 homolog, SAGA complex component | ||
| B4E2D5 C9JQS2 F6S7C4 H7C5F9 Q8NEM7 R4GND2 | ||||
| 55578 | ||||
| Autophagy - animal | ||||
20
|
CCNL1 | ENSG00000163660 | cyclin L1 | ||
| H7C4G1 Q9UK58 | ||||
| 57018 | ||||
15
|
HNRNPA1 | ENSG00000135486 | heterogeneous nuclear ribonucleoprotein A1 | ||
| F8VTQ5 F8VYN5 F8VZ49 F8W646 F8W6I7 H0YH80 P09651 | ||||
| 3178 | ||||
| Spliceosome | ||||
25
|
SF3B2 | ENSG00000087365 | splicing factor 3b subunit 2 | ||
| E9PIL8 E9PJ04 E9PJT3 E9PPJ0 H0YCG1 H0YEX5 Q13435 | ||||
| 10992 | ||||
| Spliceosome | ||||
22
|
SMC3 | ENSG00000108055 | structural maintenance of chromosomes 3 | ||
| Q9UQE7 | ||||
| 9126 | ||||
| Oocyte meiosis Cell cycle | ||||
13
|
CCNT2 | ENSG00000082258 | cyclin T2 | ||
| C9JUL2 F2Z2C9 F8WDY7 H7BZ27 H7C411 O60583 | ||||
| 905 | ||||
15
|
PPP1CB | ENSG00000213639 | protein phosphatase 1 catalytic subunit beta | ||
| C9J9S3 C9JP48 E7ETD8 F8WE71 H0Y3Y6 P62140 | ||||
| 5500 | ||||
| Long-term potentiation Focal adhesion Oocyte meiosis cAMP signaling pathway cGMP-PKG signaling pathway Adrenergic signaling in cardiomyocytes Dopaminergic synapse Vascular smooth muscle contraction Hippo signaling pathway Insulin signaling pathway Oxytocin signaling pathway | ||||
| mRNA surveillance pathway | ||||
20
|
U2AF2 | ENSG00000063244 | U2 small nuclear RNA auxiliary factor 2 | ||
| K7ELP8 K7ENG2 M0QYQ9 P26368 | ||||
| 11338 | ||||
| Spliceosome | ||||
13
|
RNPS1 | ENSG00000205937 | RNA binding protein with serine rich domain 1 | ||
| H3BMM9 H3BMS0 H3BNI3 H3BNU7 H3BP82 H3BPG5 H3BRK4 H3BTC0 H3BTR6 H3BTV0 H3BTY0 H3BUG0 H3BUL0 H3BV80 Q15287 | ||||
| 10921 | ||||
| RNA transport mRNA surveillance pathway | ||||
11
|
BAZ1B | ENSG00000009954 | bromodomain adjacent to zinc finger domain 1B | ||
| Q9UIG0 | ||||
| 9031 | ||||
25
|
SRRT | ENSG00000087087 | serrate, RNA effector molecule | ||
| A0A087X0F4 A0A0A0MSP6 A0A286YEP7 C9JUL9 H7C0U8 H7C1K0 H7C3A1 Q9BXP5 | ||||
| 51593 | ||||
13
|
PAXBP1 | ENSG00000159086 | PAX3 and PAX7 binding protein 1 | ||
| H7BZC8 H7C2W4 Q9Y5B6 | ||||
| 94104 | ||||
3
|
TENT2 | ENSG00000164329 | terminal nucleotidyltransferase 2 | ||
| D6RAF2 Q6PIY7 | ||||
| 167153 | ||||
7
|
TENT4B | ENSG00000121274 | terminal nucleotidyltransferase 4B | ||
| E9PC61 H3BQM0 Q8NDF8 | ||||
| 64282 | ||||
| RNA degradation | ||||
3
|
PAK5 | ENSG00000101349 | p21 (RAC1) activated kinase 5 | ||
| Q9P286 | ||||
| 57144 | ||||
| Focal adhesion Ras signaling pathway ErbB signaling pathway T cell receptor signaling pathway | ||||
10
|
TAF7 | ENSG00000178913 | TATA-box binding protein associated factor 7 | ||
| A0A096LPC3 Q15545 | ||||
| 6879 | ||||
| Basal transcription factors | ||||
19
|
POLR2B | ENSG00000047315 | RNA polymerase II subunit B | ||
| A0A1W2PPT5 C9J2Y9 C9J4M6 C9JMN3 C9JZW8 P30876 | ||||
| 5431 | ||||
| RNA polymerase | ||||
15
|
EEF1G | ENSG00000254772 | eukaryotic translation elongation factor 1 gamma | ||
| P26641 | ||||
| 1937 | ||||
15
|
PRPF38B | ENSG00000134186 | pre-mRNA processing factor 38B | ||
| A0A0A0MRN0 Q5VTL8 | ||||
| 55119 | ||||
| Spliceosome | ||||
19
|
SRSF7 | ENSG00000115875 | serine and arginine rich splicing factor 7 | ||
| A0A0B4J1Z1 C9JAB2 F8WEA1 H7BZZ6 H7C1N1 Q16629 | ||||
| 6432 | ||||
| Spliceosome | ||||
5
|
MATR3 | ENSG00000015479 | matrin 3 | ||
| A0A1B0GX04 B3KM87 D6R991 D6R9F3 D6RAY2 D6RBI2 D6RBK5 D6RBS2 D6RE02 D6REK4 D6REM6 D6RIA2 H0Y8T4 P43243 Q68E03 | ||||
| 9782 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 298.81 KB | |
H.sapiens_subnetwork.tsv | 47.71 KB |